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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS18630 and PFLU_RS18635 overlap by 4 nucleotides
PFLU_RS18635 and PFLU_RS18640 are separated by 136 nucleotides
PFLU_RS18640 and PFLU_RS18645 overlap by 4 nucleotides
PFLU_RS18645 and PFLU_RS18650 are separated by 11 nucleotides
PFLU_RS18630: PFLU_RS18630 - NADH-quinone oxidoreductase subunit NuoE, at 4,216,712 to 4,217,209
_RS18630
PFLU_RS18635: PFLU_RS18635 - NADH-quinone oxidoreductase subunit NuoF, at 4,217,206 to 4,218,561
_RS18635
PFLU_RS18640: PFLU_RS18640 - NADH-quinone oxidoreductase subunit NuoG, at 4,218,698 to 4,221,412
_RS18640
PFLU_RS18645: PFLU_RS18645 - NADH-quinone oxidoreductase subunit NuoH, at 4,221,409 to 4,222,416
_RS18645
PFLU_RS18650: PFLU_RS18650 - NADH-quinone oxidoreductase subunit NuoI, at 4,222,428 to 4,222,976
_RS18650
Group
Condition
PFLU
_RS18630
PFLU
_RS18635
PFLU
_RS18640
PFLU
_RS18645
PFLU
_RS18650
carbon source
NAG (C); with MOPS
-2.8
-3.1
-3.3
-3.1
-2.6
carbon source
L-Arabinose (C); with MOPS
-2.9
-3.2
-3.5
-2.8
-2.1
carbon source
NAG (C); with MOPS
-2.8
-2.7
-3.2
-3.1
-2.4
carbon source
L-Arabinose (C); with MOPS
-2.8
-3.1
-2.7
-3.1
-2.6
carbon source
NAG (C); with MOPS
-2.8
-2.9
-3.1
-3.1
-2.3
carbon source
acetate (C)
-2.4
-2.9
-2.6
-2.7
-2.2
carbon source
acetate (C)
-2.3
-2.7
-2.9
-2.6
-1.9
carbon source
L-Arabinose (C); with MOPS
-2.3
-2.6
-2.8
-2.5
-2.1
carbon source
Trisodium citrate (C)
-2.8
-2.1
-2.1
-2.1
-2.2
carbon source
acetate (C)
-2.3
-2.2
-2.5
-1.6
-2.1
carbon source
NAG (C)
-2.5
-2.3
-2.0
-1.7
-1.9
carbon source
Trisodium citrate (C); with MOPS
-1.4
-2.6
-2.4
-1.7
-2.3
carbon source
Trisodium citrate (C); with MOPS
-2.0
-1.7
-1.9
-2.0
-2.4
carbon source
L-Arabinose (C)
-2.1
-2.3
-1.7
-1.6
-2.1
carbon source
D-Xylose (C)
-3.2
-1.8
-1.6
-1.6
-1.4
carbon source
Trisodium citrate (C)
-1.8
-2.8
-2.3
-1.2
-1.6
carbon source
Trisodium citrate (C); with MOPS
-1.5
-2.8
-2.2
-1.4
-1.6
carbon source
L-Arabinose (C)
-1.4
-1.7
-2.4
-1.4
-2.2
carbon source
D-Glucose (C)
-1.2
-2.1
-1.2
-2.2
-2.3
carbon source
Trisodium citrate (C)
-1.1
-2.0
-2.9
-2.3
-0.4
carbon source
NAG (C)
-1.4
-1.8
-1.5
-1.8
-2.1
carbon source
succinate (C); with MOPS
-2.2
-1.0
-1.8
-0.7
-1.7
carbon source
D-Xylose (C)
-1.7
-1.2
-1.9
-1.6
-0.9
carbon source
D-Glucose (C); with MOPS
-1.7
-1.4
-0.9
-1.6
-1.4
carbon source
D-Glucose (C)
-1.2
-2.0
-1.2
-1.1
-1.4
carbon source
D-Glucose (C)
-0.8
-1.9
-1.3
-0.9
-1.9
carbon source
succinate (C); with MOPS
-1.4
-1.2
-1.6
-1.6
-0.9
carbon source
succinate (C)
-1.2
-1.5
-1.3
-1.6
-0.8
carbon source
L-Arabinose (C)
-0.5
-1.9
-1.4
-1.3
-1.3
carbon source
D-Glucose (C); with MOPS
-0.6
-1.6
-1.8
-1.2
-1.1
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