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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS18600 and PFLU_RS18605 are separated by 229 nucleotides
PFLU_RS18605 and PFLU_RS18610 are separated by 489 nucleotides
PFLU_RS18610 and PFLU_RS18615 are separated by 569 nucleotides
PFLU_RS18615 and PFLU_RS18620 are separated by 10 nucleotides
PFLU_RS18600: PFLU_RS18600 - GNAT family N-acetyltransferase, at 4,209,980 to 4,210,402
_RS18600
PFLU_RS18605: PFLU_RS18605 - secretin, at 4,210,632 to 4,211,369
_RS18605
PFLU_RS18610: PFLU_RS18610 - isocitrate lyase, at 4,211,859 to 4,213,184
_RS18610
PFLU_RS18615: PFLU_RS18615 - NADH-quinone oxidoreductase subunit A, at 4,213,754 to 4,214,167
_RS18615
PFLU_RS18620: PFLU_RS18620 - NADH-quinone oxidoreductase subunit B, at 4,214,178 to 4,214,852
_RS18620
Group
Condition
PFLU
_RS18600
PFLU
_RS18605
PFLU
_RS18610
PFLU
_RS18615
PFLU
_RS18620
carbon source
acetate (C)
-0.6
+0.2
-5.0
-2.6
-2.7
carbon source
acetate (C)
-0.3
+0.3
-5.1
-2.5
-2.6
carbon source
acetate (C)
-0.4
+0.4
-5.0
-2.4
-2.5
carbon source
NAG (C); with MOPS
-0.3
+0.0
-2.4
-2.9
-2.9
carbon source
NAG (C); with MOPS
-0.0
+0.2
-2.7
-2.9
-2.8
carbon source
NAG (C); with MOPS
+0.2
+0.3
-2.5
-3.0
-2.8
carbon source
L-Arabinose (C); with MOPS
-0.7
-0.0
-0.0
-3.0
-2.8
carbon source
L-Arabinose (C); with MOPS
-0.7
-0.3
-0.1
-2.4
-2.5
carbon source
L-Arabinose (C); with MOPS
-0.5
-0.0
-0.1
-2.0
-3.0
carbon source
L-Arabinose (C)
-1.6
-0.2
-0.3
-1.6
-1.8
carbon source
D-Glucose (C)
-0.4
-0.1
+0.1
-2.3
-2.1
carbon source
L-Arabinose (C)
-0.7
-0.3
-0.2
-2.8
-1.0
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.2
+0.2
-2.9
-2.1
carbon source
Trisodium citrate (C)
-0.8
-0.1
+0.0
-1.7
-2.0
carbon source
acetate (C)
+0.1
-0.0
-4.5
-0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.1
+0.1
-2.3
-1.9
carbon source
Trisodium citrate (C)
+0.2
-0.3
+0.3
-1.7
-2.2
carbon source
L-Arabinose (C)
-0.2
+0.1
-0.5
-1.6
-1.6
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
+0.1
-1.5
-2.2
carbon source
NAG (C)
-0.1
+0.2
+0.0
-2.1
-1.6
carbon source
D-Glucose (C); with MOPS
-0.3
-0.7
-0.0
-0.8
-1.5
carbon source
NAG (C)
+0.2
+0.0
+0.0
-2.2
-1.2
carbon source
acetate (C)
+0.2
-0.1
-3.9
+0.3
+0.3
carbon source
D-Glucose (C)
-0.6
-0.3
+0.0
-1.1
-0.9
carbon source
D-Glucose (C)
-0.3
-0.2
+0.0
-0.7
-1.5
carbon source
D-Xylose (C)
+0.3
-0.1
+0.1
-1.0
-1.6
carbon source
Trisodium citrate (C)
+0.0
-0.0
+0.0
-0.3
-1.9
carbon source
succinate (C); with MOPS
-0.0
+0.2
+0.0
-1.1
-1.2
carbon source
D-Xylose (C)
+0.3
+0.2
+0.1
-1.3
-1.3
carbon source
D,L-Lactate (C)
-0.1
-0.2
+0.1
+0.7
+0.9
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