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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS18415 and PFLU_RS18420 are separated by 71 nucleotides
PFLU_RS18420 and PFLU_RS18425 overlap by 4 nucleotides
PFLU_RS18425 and PFLU_RS18430 are separated by 79 nucleotides
PFLU_RS18430 and PFLU_RS18435 are separated by 115 nucleotides
PFLU_RS18415: PFLU_RS18415 - 2-hydroxyacid dehydrogenase, at 4,175,365 to 4,176,354
_RS18415
PFLU_RS18420: PFLU_RS18420 - hypothetical protein, at 4,176,426 to 4,176,866
_RS18420
PFLU_RS18425: PFLU_RS18425 - META domain-containing protein, at 4,176,863 to 4,177,267
_RS18425
PFLU_RS18430: PFLU_RS18430 - TlpA family protein disulfide reductase, at 4,177,347 to 4,177,808
_RS18430
PFLU_RS18435: PFLU_RS18435 - arsenate reductase (glutaredoxin), at 4,177,924 to 4,178,277
_RS18435
Group
Condition
PFLU
_RS18415
PFLU
_RS18420
PFLU
_RS18425
PFLU
_RS18430
PFLU
_RS18435
carbon source
acetate (C)
-0.4
-4.5
-0.2
-0.3
+0.9
carbon source
L-Arabinose (C)
+0.1
-3.3
-0.7
+0.4
-0.1
carbon source
succinate (C)
+0.0
-2.3
+0.2
+0.0
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.3
-2.7
+0.1
-0.1
+0.5
carbon source
D-Glucose (C); with MOPS
-0.2
-1.0
+0.0
+0.2
-0.7
carbon source
NAG (C); with MOPS
-0.0
-2.0
+0.2
+0.2
+0.2
carbon source
succinate (C)
+0.0
-1.5
+0.1
-0.1
+0.2
carbon source
succinate (C); with MOPS
-0.0
-0.9
-0.1
-0.2
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.5
-0.6
+0.2
-0.1
carbon source
NAG (C); with MOPS
-0.4
-0.7
+0.1
-0.2
+0.3
carbon source
L-Arabinose (C)
+0.2
-1.3
-0.0
+0.2
-0.0
carbon source
Trisodium citrate (C)
-0.1
-0.8
-0.2
-0.0
+0.2
carbon source
acetate (C)
-0.1
+0.2
-0.4
-0.2
-0.4
carbon source
D-Glucose (C)
+0.1
-0.6
-0.0
-0.2
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.8
+0.0
+0.3
-0.2
carbon source
acetate (C)
+0.4
-0.7
-0.4
-0.1
-0.0
carbon source
D-Glucose (C); with MOPS
+0.1
-0.4
-0.2
-0.1
+0.0
carbon source
succinate (C); with MOPS
+0.0
-0.6
-0.3
+0.1
+0.1
carbon source
NAG (C); with MOPS
-0.1
-0.2
-0.2
-0.3
+0.1
carbon source
D,L-Lactate (C)
-0.0
+0.1
-0.4
+0.0
-0.3
carbon source
D-Glucose (C)
+0.2
-1.5
+0.3
+0.2
+0.3
carbon source
succinate (C); with MOPS
+0.2
-0.1
-0.4
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.6
-0.0
+0.2
+0.3
carbon source
D-Xylose (C)
-0.1
+0.3
-0.1
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.3
-0.2
+0.1
+0.3
carbon source
acetate (C)
+0.1
-0.3
-0.2
+0.4
+0.0
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.6
-0.4
-0.0
+0.1
carbon source
acetate (C)
+0.5
+1.4
-1.3
-0.2
-0.0
carbon source
D-Glucose (C); with MOPS
+0.1
+1.0
-0.3
-0.4
+0.3
carbon source
succinate (C)
+0.1
+0.5
-0.2
+0.3
+0.5
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