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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS17840 and PFLU_RS17845 are separated by 180 nucleotides
PFLU_RS17845 and PFLU_RS17850 overlap by 4 nucleotides
PFLU_RS17850 and PFLU_RS17855 overlap by 4 nucleotides
PFLU_RS17855 and PFLU_RS17860 are separated by 21 nucleotides
PFLU_RS17840: PFLU_RS17840 - undecaprenyl-phosphate glucose phosphotransferase, at 4,050,870 to 4,052,261
_RS17840
PFLU_RS17845: PFLU_RS17845 - YjbH domain-containing protein, at 4,052,442 to 4,054,517
_RS17845
PFLU_RS17850: PFLU_RS17850 - hypothetical protein, at 4,054,514 to 4,055,284
_RS17850
PFLU_RS17855: PFLU_RS17855 - YjbF family lipoprotein, at 4,055,281 to 4,055,925
_RS17855
PFLU_RS17860: PFLU_RS17860 - capsular polysaccharide biosynthesis protein, at 4,055,947 to 4,057,059
_RS17860
Group
Condition
PFLU
_RS17840
PFLU
_RS17845
PFLU
_RS17850
PFLU
_RS17855
PFLU
_RS17860
carbon source
acetate (C)
-0.4
-0.2
-0.4
-3.1
-0.1
carbon source
NAG (C); with MOPS
-0.1
-0.0
-0.6
-2.1
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.0
-0.2
-1.8
-0.2
carbon source
L-Arabinose (C)
-0.2
-0.1
-0.7
-0.6
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.1
-1.0
-0.3
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.0
-0.5
-1.0
+0.0
carbon source
succinate (C); with MOPS
-0.0
+0.0
-0.1
-1.3
+0.1
carbon source
D-Glucose (C); with MOPS
+0.1
-0.2
-0.0
-1.0
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.1
-1.0
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.3
-0.4
-0.2
-0.2
carbon source
succinate (C); with MOPS
+0.1
-0.0
+0.4
-1.3
-0.1
carbon source
succinate (C); with MOPS
-0.1
-0.0
-0.5
-0.3
+0.0
carbon source
D-Glucose (C)
+0.0
-0.1
-0.4
-0.4
+0.0
carbon source
D-Glucose (C); with MOPS
+0.0
-0.0
-0.2
-0.6
-0.0
carbon source
D-Glucose (C)
+0.0
-0.1
-0.3
-0.5
+0.0
carbon source
Trisodium citrate (C)
-0.0
-0.1
-0.2
-0.5
+0.1
carbon source
acetate (C)
-0.1
+0.3
-0.7
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.3
-0.3
+0.1
-0.8
+0.1
carbon source
D-Xylose (C)
+0.1
-0.4
+0.2
-0.3
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.0
+0.1
-0.6
-0.0
carbon source
D-Glucose (C)
+0.1
-0.1
-0.5
-0.1
+0.1
carbon source
succinate (C)
-0.1
+0.0
-0.4
+0.3
-0.1
carbon source
D,L-Lactate (C)
-0.2
-0.2
-0.2
+0.3
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.2
-0.3
+0.1
carbon source
acetate (C)
-0.0
-0.1
-0.3
+0.4
-0.1
carbon source
Trisodium citrate (C)
+0.2
+0.0
-0.4
-0.1
+0.2
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.3
+0.3
+0.1
carbon source
D-Xylose (C)
+0.3
-0.2
+0.0
+0.3
-0.0
carbon source
acetate (C)
-0.1
-0.2
+0.2
+0.7
+0.0
carbon source
NAG (C)
+0.1
-0.0
-0.1
+0.5
+0.1
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