Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS17705 and PFLU_RS17710 overlap by 4 nucleotidesPFLU_RS17710 and PFLU_RS17715 are separated by 97 nucleotidesPFLU_RS17715 and PFLU_RS17720 are separated by 188 nucleotidesPFLU_RS17720 and PFLU_RS17725 overlap by 59 nucleotides PFLU_RS17705: PFLU_RS17705 - sigma-70 family RNA polymerase sigma factor, at 4,019,776 to 4,020,288 _RS17705 PFLU_RS17710: PFLU_RS17710 - DUF4880 domain-containing protein, at 4,020,285 to 4,021,235 _RS17710 PFLU_RS17715: PFLU_RS17715 - TonB-dependent siderophore receptor, at 4,021,333 to 4,023,795 _RS17715 PFLU_RS17720: PFLU_RS17720 - AraC family transcriptional regulator, at 4,023,984 to 4,024,877 _RS17720 PFLU_RS17725: PFLU_RS17725 - LysE family translocator, at 4,024,819 to 4,025,406 _RS17725
Group Condition PFLU_RS17705 PFLU_RS17710 PFLU_RS17715 PFLU_RS17720 PFLU_RS17725
carbon source L-Arabinose (C); with MOPS -1.0 -0.2 +0.0 -0.1 -0.2
carbon source L-Arabinose (C) -0.8 -0.2 +0.1 +0.2 -0.0
carbon source NAG (C); with MOPS -0.1 -0.0 -0.1 -0.2 -0.1
carbon source L-Arabinose (C); with MOPS -0.2 -0.1 +0.0 -0.1 -0.1
carbon source acetate (C) +0.0 -0.1 -0.1 -0.0 -0.1
carbon source D-Glucose (C) -0.1 -0.1 -0.0 -0.1 -0.0
carbon source Trisodium citrate (C); with MOPS +0.1 -0.4 +0.1 -0.1 +0.1
carbon source succinate (C) +0.0 -0.1 +0.1 -0.1 -0.0
carbon source D-Glucose (C); with MOPS -0.1 -0.1 +0.1 +0.1 -0.2
carbon source D-Glucose (C); with MOPS +0.2 +0.1 +0.0 +0.0 -0.5
carbon source D-Xylose (C) -0.0 -0.1 -0.1 +0.0 +0.1
carbon source succinate (C) -0.3 -0.1 -0.1 +0.1 +0.4
carbon source succinate (C); with MOPS -0.1 -0.1 +0.1 +0.0 +0.0
carbon source succinate (C); with MOPS -0.2 -0.1 +0.1 -0.1 +0.2
carbon source NAG (C); with MOPS -0.3 +0.3 -0.0 -0.1 +0.1
carbon source succinate (C) +0.2 -0.1 +0.1 -0.0 -0.2
carbon source acetate (C) -0.2 +0.1 -0.0 +0.1 +0.0
carbon source L-Arabinose (C); with MOPS +0.0 +0.1 +0.1 -0.1 -0.1
carbon source Trisodium citrate (C) -0.1 -0.2 +0.1 -0.0 +0.3
carbon source Trisodium citrate (C) -0.1 +0.1 +0.1 -0.2 +0.1
carbon source NAG (C) +0.0 -0.0 -0.1 -0.1 +0.2
carbon source acetate (C) -0.7 -0.0 +0.0 +0.3 +0.6
carbon source D,L-Lactate (C) +0.1 +0.1 -0.2 +0.0 +0.1
carbon source NAG (C); with MOPS +0.1 -0.1 -0.0 +0.0 +0.2
carbon source Trisodium citrate (C) +0.1 +0.1 +0.1 -0.1 +0.1
carbon source Trisodium citrate (C); with MOPS +0.5 +0.1 +0.1 -0.2 -0.1
carbon source acetate (C) +0.2 -0.1 -0.1 -0.0 +0.3
carbon source L-Arabinose (C) +0.4 -0.3 -0.0 -0.1 +0.5
carbon source succinate (C); with MOPS +0.2 +0.0 +0.1 -0.0 +0.4
carbon source Trisodium citrate (C); with MOPS +0.1 +0.0 +0.1 +0.1 +0.3
remove
PFLU_RS17705
plot
remove
PFLU_RS17710
plot
remove
PFLU_RS17715
remove
PFLU_RS17720
plot
remove
PFLU_RS17725
plot