Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS17560 and PFLU_RS17565 are separated by 126 nucleotides
PFLU_RS17565 and PFLU_RS17570 overlap by 4 nucleotides
PFLU_RS17570 and PFLU_RS17575 are separated by 7 nucleotides
PFLU_RS17575 and PFLU_RS17580 overlap by 1 nucleotides
PFLU_RS17560: PFLU_RS17560 - response regulator, at 3,991,636 to 3,993,348
_RS17560
PFLU_RS17565: PFLU_RS17565 - error-prone DNA polymerase, at 3,993,475 to 3,996,546
_RS17565
PFLU_RS17570: PFLU_RS17570 - DNA polymerase Y family protein, at 3,996,543 to 3,997,955
_RS17570
PFLU_RS17575: PFLU_RS17575 - translesion DNA synthesis-associated protein ImuA, at 3,997,963 to 3,998,577
_RS17575
PFLU_RS17580: PFLU_RS17580 - repressor LexA, at 3,998,577 to 3,999,194
_RS17580
Group
Condition
PFLU
_RS17560
PFLU
_RS17565
PFLU
_RS17570
PFLU
_RS17575
PFLU
_RS17580
carbon source
NAG (C)
-0.2
-0.0
+0.1
N.D.
-1.1
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.3
N.D.
-0.6
carbon source
D-Glucose (C); with MOPS
-0.2
-0.0
-0.2
N.D.
-0.4
carbon source
D-Glucose (C)
+0.1
-0.2
-0.2
N.D.
-0.3
carbon source
succinate (C)
-0.4
-0.0
-0.2
N.D.
+0.2
carbon source
succinate (C); with MOPS
-0.0
+0.1
-0.1
N.D.
-0.4
carbon source
succinate (C)
+0.1
-0.0
-0.0
N.D.
-0.5
carbon source
NAG (C)
-0.2
+0.1
+0.1
N.D.
-0.3
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.2
+0.0
N.D.
-0.5
carbon source
Trisodium citrate (C)
+0.0
+0.0
+0.3
N.D.
-0.5
carbon source
D-Xylose (C)
+0.1
-0.1
+0.2
N.D.
-0.3
carbon source
L-Arabinose (C)
-0.5
+0.1
-0.1
N.D.
+0.4
carbon source
acetate (C)
-0.3
-0.3
+1.0
N.D.
-0.5
carbon source
L-Arabinose (C)
-0.3
+0.2
-0.1
N.D.
+0.2
carbon source
succinate (C); with MOPS
-0.1
-0.0
+0.3
N.D.
-0.2
carbon source
acetate (C)
-0.1
-0.1
+0.4
N.D.
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.3
+0.6
N.D.
-0.2
carbon source
D-Glucose (C)
-0.1
+0.1
+0.4
N.D.
-0.2
carbon source
acetate (C)
-0.0
+0.4
+0.3
N.D.
-0.2
carbon source
Trisodium citrate (C)
+0.1
+0.3
+0.2
N.D.
-0.1
carbon source
succinate (C); with MOPS
-0.0
+0.2
-0.1
N.D.
+0.5
carbon source
NAG (C); with MOPS
+0.0
+0.2
+0.2
N.D.
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.2
+0.6
N.D.
+0.1
carbon source
acetate (C)
-0.1
+0.2
+0.5
N.D.
+0.1
carbon source
NAG (C); with MOPS
-0.2
+0.2
-0.0
N.D.
+0.9
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.1
+0.6
N.D.
+0.3
carbon source
D-Glucose (C); with MOPS
+0.0
-0.1
+0.1
N.D.
+0.9
carbon source
D-Glucose (C); with MOPS
-0.0
-0.0
+0.7
N.D.
+0.2
carbon source
L-Arabinose (C)
+0.1
+0.2
+0.7
N.D.
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.0
+0.3
N.D.
+1.3
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