Fitness for 5 genes in Pseudomonas fluorescens SBW25

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPFLU_RS17410 and PFLU_RS17415 are separated by 117 nucleotidesPFLU_RS17415 and PFLU_RS17420 are separated by 7 nucleotidesPFLU_RS17420 and PFLU_RS17425 are separated by 9 nucleotidesPFLU_RS17425 and PFLU_RS17430 overlap by 4 nucleotides PFLU_RS17410: PFLU_RS17410 - diguanylate cyclase, at 3,958,582 to 3,960,225 _RS17410 PFLU_RS17415: PFLU_RS17415 - OprD family porin, at 3,960,343 to 3,961,662 _RS17415 PFLU_RS17420: PFLU_RS17420 - phosphodiesterase, at 3,961,670 to 3,962,503 _RS17420 PFLU_RS17425: PFLU_RS17425 - ABC transporter ATP-binding protein, at 3,962,513 to 3,963,544 _RS17425 PFLU_RS17430: PFLU_RS17430 - ABC transporter permease subunit, at 3,963,541 to 3,964,335 _RS17430
Group Condition PFLU_RS17410 PFLU_RS17415 PFLU_RS17420 PFLU_RS17425 PFLU_RS17430
carbon source acetate (C) +0.1 +0.1 -1.2 -0.5 -0.7
carbon source acetate (C) +0.5 -0.1 -1.3 -0.3 +0.1
carbon source acetate (C) +0.0 -0.2 -0.8 +0.1 +0.0
carbon source acetate (C) -0.0 -0.1 -0.4 -0.1 -0.2
carbon source L-Arabinose (C) -0.2 -0.2 +0.2 -0.2 -0.4
carbon source D-Glucose (C) +0.2 -0.0 -0.8 -0.0 +0.0
carbon source NAG (C) -0.1 +0.1 -0.4 -0.1 -0.1
carbon source Trisodium citrate (C); with MOPS +0.1 -0.1 -0.6 +0.1 +0.1
carbon source succinate (C) +0.2 -0.2 -0.4 +0.1 -0.2
carbon source D-Glucose (C) -0.1 -0.3 -0.4 +0.1 +0.2
carbon source acetate (C) -0.1 -0.1 +0.2 -0.1 -0.3
carbon source succinate (C) -0.0 -0.1 -0.3 +0.2 -0.1
carbon source NAG (C); with MOPS +0.1 +0.2 -0.5 +0.2 -0.3
carbon source D-Xylose (C) -0.1 -0.0 -0.1 -0.2 +0.1
carbon source L-Arabinose (C) -0.5 +0.3 +0.0 -0.1 +0.1
carbon source NAG (C); with MOPS +0.0 -0.2 -0.1 +0.2 -0.2
carbon source succinate (C); with MOPS -0.0 -0.1 -0.3 +0.1 +0.2
carbon source NAG (C) -0.4 +0.0 +0.2 +0.2 +0.0
carbon source D,L-Lactate (C) +0.0 -0.1 +0.1 -0.2 +0.1
carbon source succinate (C); with MOPS +0.2 -0.2 +0.2 +0.1 -0.3
carbon source D-Xylose (C) +0.1 -0.1 +0.3 +0.1 -0.1
carbon source Trisodium citrate (C) +0.2 +0.0 -0.3 +0.2 +0.1
carbon source succinate (C) +0.2 -0.2 +0.2 +0.2 -0.1
carbon source D-Glucose (C); with MOPS +0.2 -0.1 -0.1 +0.2 +0.1
carbon source Trisodium citrate (C); with MOPS -0.0 -0.2 +0.4 +0.3 -0.0
carbon source Trisodium citrate (C); with MOPS -0.2 -0.1 +0.5 +0.3 +0.0
carbon source NAG (C); with MOPS +0.5 +0.1 -0.2 +0.3 -0.1
carbon source D-Glucose (C); with MOPS +0.3 -0.1 +0.0 +0.2 +0.2
carbon source D-Glucose (C); with MOPS +0.2 -0.1 +0.3 +0.3 +0.3
carbon source D-Glucose (C) +0.2 +0.1 +0.5 +0.4 +0.1
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