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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS17035 and PFLU_RS17040 are separated by 129 nucleotides
PFLU_RS17040 and PFLU_RS17045 are separated by 22 nucleotides
PFLU_RS17045 and PFLU_RS17050 are separated by 0 nucleotides
PFLU_RS17050 and PFLU_RS17055 are separated by 155 nucleotides
PFLU_RS17035: PFLU_RS17035 - 2-hydroxyacid dehydrogenase, at 3,863,801 to 3,864,754
_RS17035
PFLU_RS17040: PFLU_RS17040 - phosphotransferase family protein, at 3,864,884 to 3,865,951
_RS17040
PFLU_RS17045: PFLU_RS17045 - SDR family oxidoreductase, at 3,865,974 to 3,866,741
_RS17045
PFLU_RS17050: PFLU_RS17050 - carboxymuconolactone decarboxylase family protein, at 3,866,742 to 3,867,185
_RS17050
PFLU_RS17055: PFLU_RS17055 - PLP-dependent aminotransferase family protein, at 3,867,341 to 3,868,774
_RS17055
Group
Condition
PFLU
_RS17035
PFLU
_RS17040
PFLU
_RS17045
PFLU
_RS17050
PFLU
_RS17055
carbon source
L-Arabinose (C)
-0.9
+0.1
-1.2
N.D.
-0.1
carbon source
NAG (C); with MOPS
-0.8
+0.2
-0.9
N.D.
-0.0
carbon source
acetate (C)
-0.4
+0.0
-0.4
N.D.
-0.3
carbon source
succinate (C); with MOPS
-0.6
-0.1
-0.2
N.D.
-0.0
carbon source
succinate (C); with MOPS
-0.4
+0.1
-0.5
N.D.
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.6
-0.0
-0.1
N.D.
-0.1
carbon source
acetate (C)
+0.0
-0.2
-0.4
N.D.
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.5
-0.1
-0.3
N.D.
+0.2
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.6
N.D.
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.4
+0.0
-0.4
N.D.
-0.1
carbon source
succinate (C); with MOPS
+0.3
+0.1
-1.1
N.D.
-0.1
carbon source
D-Glucose (C)
-0.0
+0.1
-0.6
N.D.
-0.1
carbon source
D-Glucose (C)
-0.5
-0.1
-0.1
N.D.
-0.1
carbon source
Trisodium citrate (C)
-0.0
+0.0
-0.7
N.D.
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
-0.6
N.D.
+0.0
carbon source
D-Glucose (C); with MOPS
-0.5
+0.2
-0.3
N.D.
-0.0
carbon source
NAG (C); with MOPS
-0.6
+0.1
-0.3
N.D.
+0.3
carbon source
succinate (C)
-0.3
-0.1
-0.2
N.D.
+0.0
carbon source
D,L-Lactate (C)
-0.2
+0.0
-0.3
N.D.
-0.1
carbon source
NAG (C); with MOPS
+0.0
+0.2
-0.5
N.D.
-0.2
carbon source
D-Glucose (C)
-0.0
-0.2
-0.3
N.D.
+0.0
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.6
N.D.
+0.2
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
-0.3
N.D.
-0.1
carbon source
L-Arabinose (C)
+0.3
+0.1
-0.5
N.D.
-0.3
carbon source
acetate (C)
-0.2
+0.1
-0.1
N.D.
-0.1
carbon source
NAG (C)
-0.1
+0.0
-0.2
N.D.
+0.1
carbon source
succinate (C)
+0.1
+0.0
-0.5
N.D.
+0.1
carbon source
D-Xylose (C)
+0.1
+0.1
-0.3
N.D.
-0.1
carbon source
D,L-Lactate (C)
+0.1
+0.1
-0.4
N.D.
+0.1
carbon source
NAG (C)
+0.0
+0.2
-0.4
N.D.
+0.0
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