Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS16795 and PFLU_RS16800 are separated by 38 nucleotidesPFLU_RS16800 and PFLU_RS16805 overlap by 49 nucleotidesPFLU_RS16805 and PFLU_RS16810 are separated by 148 nucleotidesPFLU_RS16810 and PFLU_RS16815 are separated by 0 nucleotides PFLU_RS16795: PFLU_RS16795 - alpha/beta hydrolase, at 3,810,142 to 3,811,164 _RS16795 PFLU_RS16800: PFLU_RS16800 - MFS transporter, at 3,811,203 to 3,812,363 _RS16800 PFLU_RS16805: PFLU_RS16805 - SDR family oxidoreductase, at 3,812,315 to 3,812,590 _RS16805 PFLU_RS16810: PFLU_RS16810 - EAL domain-containing protein, at 3,812,739 to 3,815,312 _RS16810 PFLU_RS16815: PFLU_RS16815 - helix-turn-helix transcriptional regulator, at 3,815,313 to 3,816,134 _RS16815
Group Condition PFLU_RS16795 PFLU_RS16800 PFLU_RS16805 PFLU_RS16810 PFLU_RS16815
carbon source acetate (C) -0.2 -0.6 -1.7 +0.3 -1.1
carbon source D-Glucose (C) -0.1 -0.0 -0.5 +0.0 -0.9
carbon source acetate (C) -0.3 +0.5 -0.4 -0.2 -0.6
carbon source L-Arabinose (C) -0.4 +0.1 +0.5 -0.2 -0.7
carbon source Trisodium citrate (C) -0.3 -0.2 +0.2 +0.1 -0.4
carbon source L-Arabinose (C); with MOPS -0.6 -0.1 +0.1 +0.1 -0.0
carbon source acetate (C) -0.4 -0.5 +0.1 +0.0 +0.3
carbon source acetate (C) -0.1 -0.1 -0.0 +0.0 -0.3
carbon source D-Xylose (C) -0.2 -0.2 -0.1 +0.0 +0.1
carbon source D-Glucose (C); with MOPS -0.2 +0.2 -0.1 -0.2 -0.2
carbon source D-Glucose (C) +0.1 +0.1 -0.1 +0.1 -0.5
carbon source L-Arabinose (C) -0.1 -0.3 +0.5 +0.1 -0.3
carbon source Trisodium citrate (C) -0.2 +0.2 +0.1 -0.1 -0.0
carbon source L-Arabinose (C); with MOPS -0.4 +0.3 +0.5 +0.0 -0.5
carbon source succinate (C); with MOPS -0.1 +0.2 +0.2 +0.0 -0.2
carbon source NAG (C); with MOPS -0.3 +0.0 +0.4 +0.1 -0.0
carbon source L-Arabinose (C); with MOPS +0.1 +0.3 -0.2 +0.1 -0.1
carbon source Trisodium citrate (C); with MOPS -0.1 +0.3 +0.1 +0.2 -0.3
carbon source NAG (C) +0.1 +0.2 -0.1 -0.1 +0.1
carbon source succinate (C); with MOPS -0.2 -0.0 +0.1 +0.2 +0.2
carbon source L-Arabinose (C) -0.1 +0.0 +0.2 +0.2 -0.1
carbon source succinate (C) -0.4 +0.3 +0.0 +0.0 +0.3
carbon source D-Glucose (C); with MOPS -0.1 +0.4 -0.5 +0.2 +0.3
carbon source D-Glucose (C); with MOPS -0.1 -0.1 +0.1 +0.2 +0.4
carbon source D,L-Lactate (C) +0.1 -0.1 +0.1 -0.0 +0.4
carbon source D,L-Lactate (C) +0.1 -0.1 +0.2 +0.1 +0.2
carbon source succinate (C) -0.2 -0.1 +0.4 -0.0 +0.4
carbon source D-Glucose (C) +0.1 +0.2 +0.3 +0.2 +0.1
carbon source Trisodium citrate (C) -0.1 +0.3 +0.3 +0.2 +0.3
carbon source succinate (C); with MOPS +0.3 +0.2 +0.4 +0.1 +0.1
remove
PFLU_RS16795
plot
remove
PFLU_RS16800
plot
remove
PFLU_RS16805
remove
PFLU_RS16810
plot
remove
PFLU_RS16815
plot