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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16645 and PFLU_RS16650 are separated by 186 nucleotides
PFLU_RS16650 and PFLU_RS16655 are separated by 41 nucleotides
PFLU_RS16655 and PFLU_RS16660 are separated by 48 nucleotides
PFLU_RS16660 and PFLU_RS16665 are separated by 56 nucleotides
PFLU_RS16645: PFLU_RS16645 - GNAT family N-acetyltransferase, at 3,774,578 to 3,775,054
_RS16645
PFLU_RS16650: PFLU_RS16650 - PD-(D/E)XK nuclease family protein, at 3,775,241 to 3,776,518
_RS16650
PFLU_RS16655: PFLU_RS16655 - hypothetical protein, at 3,776,560 to 3,777,393
_RS16655
PFLU_RS16660: PFLU_RS16660 - hypothetical protein, at 3,777,442 to 3,778,167
_RS16660
PFLU_RS16665: PFLU_RS16665 - cysteine hydrolase, at 3,778,224 to 3,778,784
_RS16665
Group
Condition
PFLU
_RS16645
PFLU
_RS16650
PFLU
_RS16655
PFLU
_RS16660
PFLU
_RS16665
carbon source
acetate (C)
-0.5
-0.2
-1.0
-0.8
+0.1
carbon source
acetate (C)
-0.3
-0.4
-0.3
-0.3
+0.2
carbon source
L-Arabinose (C)
+0.2
-0.0
-0.7
-0.2
-0.3
carbon source
succinate (C)
-0.5
-0.1
-0.4
-0.2
+0.0
carbon source
L-Arabinose (C)
+0.1
-0.1
-0.2
-0.6
-0.0
carbon source
D-Xylose (C)
-0.1
-0.1
-0.3
-0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.7
+0.1
+0.0
-0.3
+0.3
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.3
-0.1
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.1
-0.2
-0.3
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
-0.1
-0.3
+0.1
carbon source
succinate (C); with MOPS
-0.0
+0.0
-0.4
+0.0
-0.1
carbon source
D,L-Lactate (C)
+0.1
+0.0
+0.1
-0.3
-0.3
carbon source
succinate (C); with MOPS
-0.3
+0.0
-0.1
-0.1
+0.0
carbon source
D,L-Lactate (C)
+0.1
+0.0
-0.2
-0.1
-0.3
carbon source
acetate (C)
-0.1
+0.3
-0.2
-0.5
+0.2
carbon source
NAG (C); with MOPS
+0.2
-0.0
-0.2
-0.3
+0.2
carbon source
D-Glucose (C)
+0.1
-0.1
+0.0
-0.3
+0.1
carbon source
D-Glucose (C)
+0.3
-0.0
-0.1
-0.1
-0.2
carbon source
D-Glucose (C)
+0.2
-0.1
+0.1
-0.3
+0.1
carbon source
succinate (C)
+0.0
-0.2
-0.0
-0.3
+0.4
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.0
+0.2
+0.1
-0.5
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.0
-0.2
-0.0
+0.2
carbon source
D-Glucose (C); with MOPS
+0.2
+0.0
-0.2
-0.3
+0.3
carbon source
NAG (C); with MOPS
+0.2
+0.0
-0.2
-0.2
+0.3
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.0
+0.3
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.0
+0.2
-0.2
+0.1
carbon source
L-Arabinose (C)
+0.3
-0.1
+0.4
-0.2
-0.0
carbon source
NAG (C); with MOPS
+0.2
+0.0
-0.0
+0.1
+0.2
carbon source
Trisodium citrate (C)
+0.2
+0.0
+0.0
+0.2
+0.2
carbon source
acetate (C)
-0.0
+0.1
+0.2
+0.2
+0.3
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