Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16580 and PFLU_RS16585 are separated by 135 nucleotides
PFLU_RS16585 and PFLU_RS16590 are separated by 125 nucleotides
PFLU_RS16590 and PFLU_RS16595 are separated by 315 nucleotides
PFLU_RS16595 and PFLU_RS16600 are separated by 383 nucleotides
PFLU_RS16580: PFLU_RS16580 - hypothetical protein, at 3,759,317 to 3,759,532
_RS16580
PFLU_RS16585: PFLU_RS16585 - GNAT family N-acetyltransferase, at 3,759,668 to 3,760,114
_RS16585
PFLU_RS16590: PFLU_RS16590 - serine hydrolase, at 3,760,240 to 3,761,127
_RS16590
PFLU_RS16595: PFLU_RS16595 - hypothetical protein, at 3,761,443 to 3,761,625
_RS16595
PFLU_RS16600: PFLU_RS16600 - VOC family protein, at 3,762,009 to 3,762,491
_RS16600
Group
Condition
PFLU
_RS16580
PFLU
_RS16585
PFLU
_RS16590
PFLU
_RS16595
PFLU
_RS16600
carbon source
acetate (C)
+0.1
-0.9
+0.0
-0.4
-0.2
carbon source
succinate (C)
-0.5
-0.1
+0.1
-0.5
-0.2
carbon source
D-Glucose (C); with MOPS
-0.3
+0.1
-0.2
-0.3
-0.3
carbon source
NAG (C); with MOPS
+0.4
+0.1
-0.2
-0.5
-0.8
carbon source
Trisodium citrate (C)
-0.3
-0.2
-0.1
-0.0
-0.2
carbon source
succinate (C)
-0.0
-0.0
-0.5
-0.0
-0.3
carbon source
D,L-Lactate (C)
-0.7
-0.3
+0.0
-0.0
+0.1
carbon source
NAG (C); with MOPS
-0.0
-0.1
-0.3
-0.3
-0.2
carbon source
NAG (C); with MOPS
+0.1
-0.3
+0.1
-0.5
-0.0
carbon source
L-Arabinose (C)
+0.5
-0.3
-0.1
-0.0
-0.8
carbon source
acetate (C)
+0.4
+0.0
+0.1
-0.5
-0.7
carbon source
D-Glucose (C)
-0.4
-0.1
+0.4
-0.4
-0.0
carbon source
D-Glucose (C); with MOPS
+0.0
-0.3
+0.2
-0.3
-0.2
carbon source
NAG (C)
-0.8
-0.0
+0.2
-0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.6
-0.5
+0.1
-0.5
-0.1
carbon source
acetate (C)
-0.5
-0.1
+0.2
-0.2
+0.2
carbon source
Trisodium citrate (C)
-0.2
+0.2
+0.2
-0.1
-0.4
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.3
+0.3
-0.5
-0.1
carbon source
D,L-Lactate (C)
-0.5
+0.1
-0.1
+0.1
+0.1
carbon source
acetate (C)
-0.4
+0.1
+0.2
-0.1
-0.1
carbon source
L-Arabinose (C)
-0.4
+0.4
+0.4
-0.1
-0.5
carbon source
D-Glucose (C); with MOPS
-0.3
+0.0
-0.2
+0.0
+0.3
carbon source
NAG (C)
-0.4
-0.0
-0.1
+0.2
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.1
+0.1
+0.1
-0.4
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.2
+0.4
-0.3
-0.4
carbon source
succinate (C); with MOPS
+0.3
-0.0
+0.4
-0.1
-0.1
carbon source
succinate (C); with MOPS
+0.2
-0.1
+0.2
+0.1
+0.3
carbon source
D-Xylose (C)
-0.1
+0.2
+0.0
+0.1
+0.6
carbon source
L-Arabinose (C); with MOPS
+0.5
-0.2
+0.1
+0.8
-0.3
carbon source
acetate (C)
+0.5
-0.6
+0.3
-0.1
+0.9
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