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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16460 and PFLU_RS16465 are separated by 103 nucleotides
PFLU_RS16465 and PFLU_RS16470 are separated by 58 nucleotides
PFLU_RS16470 and PFLU_RS16475 are separated by 121 nucleotides
PFLU_RS16475 and PFLU_RS16480 are separated by 172 nucleotides
PFLU_RS16460: PFLU_RS16460 - PIG-L family deacetylase, at 3,734,570 to 3,735,331
_RS16460
PFLU_RS16465: PFLU_RS16465 - amino acid permease, at 3,735,435 to 3,736,862
_RS16465
PFLU_RS16470: PFLU_RS16470 - histone deacetylase family protein, at 3,736,921 to 3,737,955
_RS16470
PFLU_RS16475: PFLU_RS16475 - Lrp/AsnC family transcriptional regulator, at 3,738,077 to 3,738,568
_RS16475
PFLU_RS16480: PFLU_RS16480 - TonB-dependent siderophore receptor, at 3,738,741 to 3,740,903
_RS16480
Group
Condition
PFLU
_RS16460
PFLU
_RS16465
PFLU
_RS16470
PFLU
_RS16475
PFLU
_RS16480
carbon source
NAG (C); with MOPS
-0.6
+0.1
+0.3
-0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
-0.4
+0.1
-0.1
carbon source
D-Glucose (C)
+0.0
+0.0
+0.1
-0.4
-0.1
carbon source
NAG (C); with MOPS
-0.3
+0.1
+0.2
-0.2
-0.1
carbon source
D-Glucose (C)
-0.4
+0.2
+0.1
-0.2
-0.1
carbon source
NAG (C)
-0.3
+0.1
+0.1
-0.1
+0.0
carbon source
NAG (C)
-0.5
-0.1
+0.2
+0.2
+0.0
carbon source
L-Arabinose (C)
-0.0
+0.2
+0.2
-0.5
-0.1
carbon source
succinate (C); with MOPS
+0.1
+0.1
-0.2
-0.1
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.1
-0.1
-0.4
+0.0
carbon source
D,L-Lactate (C)
-0.2
+0.1
+0.1
-0.1
+0.0
carbon source
succinate (C)
-0.3
+0.2
+0.2
-0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.0
+0.0
-0.2
-0.1
carbon source
D-Xylose (C)
+0.2
-0.0
+0.1
-0.1
-0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.2
-0.2
+0.0
carbon source
Trisodium citrate (C)
+0.3
+0.1
-0.0
-0.1
+0.0
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.1
+0.1
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.3
+0.2
-0.2
-0.0
carbon source
succinate (C)
-0.1
+0.1
+0.2
+0.3
-0.0
carbon source
Trisodium citrate (C)
+0.6
-0.0
+0.1
-0.1
-0.0
carbon source
acetate (C)
+0.5
+0.4
+0.2
-0.5
-0.1
carbon source
succinate (C); with MOPS
+0.2
+0.3
+0.2
-0.1
-0.1
carbon source
acetate (C)
+0.4
+0.1
-0.1
+0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.1
+0.0
+0.1
-0.0
carbon source
succinate (C); with MOPS
+0.6
+0.1
+0.1
-0.3
-0.1
carbon source
D,L-Lactate (C)
+0.2
+0.1
+0.2
+0.1
+0.1
carbon source
acetate (C)
+0.2
+0.2
+0.3
+0.1
-0.2
carbon source
succinate (C)
+0.1
+0.1
+0.4
+0.1
+0.0
carbon source
Trisodium citrate (C)
+0.3
+0.3
+0.1
+0.3
-0.1
carbon source
D-Glucose (C); with MOPS
+0.1
+0.3
+0.3
+0.2
-0.1
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