Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 38 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PFLU_RS16400 and PFLU_RS16405 are separated by 26 nucleotides
PFLU_RS16405 and PFLU_RS16410 are separated by 503 nucleotides
PFLU_RS16410 and PFLU_RS16415 are separated by 20 nucleotides
PFLU_RS16415 and PFLU_RS16420 overlap by 4 nucleotides
PFLU_RS16400: PFLU_RS16400 - alpha/beta hydrolase, at 3,718,178 to 3,719,179
_RS16400
PFLU_RS16405: PFLU_RS16405 - D-2-hydroxyacid dehydrogenase family protein, at 3,719,206 to 3,720,159
_RS16405
PFLU_RS16410: PFLU_RS16410 - glycogen synthase GlgA, at 3,720,663 to 3,722,216
_RS16410
PFLU_RS16415: PFLU_RS16415 - malto-oligosyltrehalose trehalohydrolase, at 3,722,237 to 3,723,982
_RS16415
PFLU_RS16420: PFLU_RS16420 - 4-alpha-glucanotransferase, at 3,723,979 to 3,726,063
_RS16420
Group
Condition
PFLU
_RS16400
PFLU
_RS16405
PFLU
_RS16410
PFLU
_RS16415
PFLU
_RS16420
carbon source
succinate (C); with MOPS
-0.2
-0.2
+0.1
-0.3
-0.1
carbon source
D-Xylose (C)
-0.1
-0.2
-0.1
+0.0
-0.1
carbon source
NAG (C); with MOPS
-0.1
-0.4
+0.8
-0.2
-0.4
carbon source
succinate (C); with MOPS
-0.1
-0.3
+0.2
+0.0
+0.1
carbon source
L-Arabinose (C)
-0.1
-0.2
+0.5
-0.1
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.2
+0.1
-0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.1
+0.6
-0.2
+0.0
carbon source
D,L-Lactate (C)
-0.1
+0.3
-0.0
-0.1
-0.1
carbon source
L-Arabinose (C)
+0.1
-0.2
+0.4
-0.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.3
+0.1
-0.1
+0.0
carbon source
Trisodium citrate (C)
-0.1
+0.3
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
-0.2
-0.1
+0.9
-0.2
-0.2
carbon source
acetate (C)
+0.0
+0.1
+0.1
-0.1
+0.1
carbon source
succinate (C)
+0.0
-0.0
+0.1
+0.0
+0.2
carbon source
D-Glucose (C)
-0.1
+0.1
+0.4
+0.1
-0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.3
+0.4
-0.2
-0.1
carbon source
succinate (C)
-0.2
+0.2
+0.1
+0.1
+0.2
carbon source
acetate (C)
-0.0
+0.3
+0.0
-0.0
+0.1
carbon source
NAG (C)
-0.1
-0.4
+1.0
+0.1
-0.1
carbon source
succinate (C)
-0.1
+0.2
+0.2
+0.2
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.3
+0.6
+0.0
+0.1
carbon source
L-Arabinose (C)
-0.0
-0.0
+0.6
+0.1
-0.2
carbon source
D-Glucose (C); with MOPS
+0.0
+0.3
+0.4
-0.2
-0.0
carbon source
D-Glucose (C)
-0.1
+0.2
+0.3
+0.1
+0.3
carbon source
acetate (C)
+0.2
+0.3
+0.0
+0.1
+0.1
carbon source
NAG (C)
-0.2
-0.1
+1.0
+0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.1
+0.6
+0.0
+0.1
carbon source
D-Glucose (C)
-0.1
+0.3
+0.5
+0.0
+0.1
carbon source
D-Glucose (C); with MOPS
+0.0
+0.5
+0.3
-0.1
+0.2
carbon source
NAG (C); with MOPS
+0.0
+0.4
+1.0
+0.0
-0.4
remove
PFLU_RS16400
plot
remove
PFLU_RS16405
plot
remove
PFLU_RS16410
remove
PFLU_RS16415
plot
remove
PFLU_RS16420
plot