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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16175 and PFLU_RS16180 are separated by 171 nucleotides
PFLU_RS16180 and PFLU_RS16185 are separated by 15 nucleotides
PFLU_RS16185 and PFLU_RS16190 are separated by 254 nucleotides
PFLU_RS16190 and PFLU_RS16195 are separated by 187 nucleotides
PFLU_RS16175: PFLU_RS16175 - polyphosphate kinase 2, at 3,674,157 to 3,675,074
_RS16175
PFLU_RS16180: PFLU_RS16180 - hypothetical protein, at 3,675,246 to 3,675,695
_RS16180
PFLU_RS16185: PFLU_RS16185 - maltose alpha-D-glucosyltransferase, at 3,675,711 to 3,677,774
_RS16185
PFLU_RS16190: PFLU_RS16190 - AraC family transcriptional regulator, at 3,678,029 to 3,678,793
_RS16190
PFLU_RS16195: PFLU_RS16195 - APC family permease, at 3,678,981 to 3,680,606
_RS16195
Group
Condition
PFLU
_RS16175
PFLU
_RS16180
PFLU
_RS16185
PFLU
_RS16190
PFLU
_RS16195
carbon source
L-Arabinose (C); with MOPS
-0.5
-0.6
+0.1
+0.0
+0.2
carbon source
L-Arabinose (C)
+0.0
+0.0
-0.1
-0.3
-0.1
carbon source
succinate (C); with MOPS
-0.1
-0.4
-0.0
+0.1
+0.0
carbon source
NAG (C)
-0.1
-0.2
+0.2
-0.1
-0.2
carbon source
D-Xylose (C)
-0.2
+0.0
-0.1
+0.1
-0.3
carbon source
NAG (C); with MOPS
+0.3
-0.5
-0.2
-0.1
+0.2
carbon source
D,L-Lactate (C)
-0.2
+0.2
-0.1
-0.2
-0.2
carbon source
D,L-Lactate (C)
-0.3
+0.1
+0.1
-0.2
-0.0
carbon source
D-Glucose (C)
-0.1
-0.2
+0.2
-0.3
-0.1
carbon source
NAG (C); with MOPS
+0.3
-0.4
-0.0
-0.3
+0.1
carbon source
L-Arabinose (C)
-0.0
-0.4
-0.0
+0.3
-0.1
carbon source
D-Glucose (C); with MOPS
+0.1
-0.3
+0.1
-0.1
+0.1
carbon source
acetate (C)
-0.2
+0.2
-0.1
-0.2
-0.1
carbon source
NAG (C)
-0.1
+0.1
+0.0
-0.2
-0.1
carbon source
acetate (C)
-0.1
+0.2
+0.1
-0.1
-0.2
carbon source
acetate (C)
-0.5
+0.3
+0.1
+0.1
-0.1
carbon source
D-Glucose (C)
+0.2
-0.2
-0.1
+0.0
+0.1
carbon source
acetate (C)
-0.2
-0.3
+0.4
+0.2
-0.2
carbon source
succinate (C)
+0.1
+0.1
-0.0
-0.2
-0.0
carbon source
L-Arabinose (C)
+0.0
-0.3
+0.1
+0.2
+0.0
carbon source
succinate (C)
-0.1
-0.0
-0.2
+0.3
+0.0
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.0
+0.1
-0.1
carbon source
succinate (C); with MOPS
+0.2
+0.0
-0.3
+0.0
+0.2
carbon source
D-Glucose (C); with MOPS
+0.3
-0.3
+0.0
+0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.1
-0.1
+0.2
+0.0
carbon source
NAG (C); with MOPS
+0.3
-0.2
-0.1
+0.2
+0.0
carbon source
acetate (C)
+0.0
-0.1
+0.1
-0.1
+0.3
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.2
+0.1
+0.2
+0.1
carbon source
succinate (C); with MOPS
-0.0
+0.3
+0.2
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.3
+0.1
+0.1
+0.2
+0.1
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