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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS16165 and PFLU_RS16170 are separated by 73 nucleotides
PFLU_RS16170 and PFLU_RS16175 are separated by 184 nucleotides
PFLU_RS16175 and PFLU_RS16180 are separated by 171 nucleotides
PFLU_RS16180 and PFLU_RS16185 are separated by 15 nucleotides
PFLU_RS16165: PFLU_RS16165 - phosphate ABC transporter permease subunit PstC, at 3,671,902 to 3,672,870
_RS16165
PFLU_RS16170: PFLU_RS16170 - phosphate ABC transporter substrate-binding protein PstS, at 3,672,944 to 3,673,972
_RS16170
PFLU_RS16175: PFLU_RS16175 - polyphosphate kinase 2, at 3,674,157 to 3,675,074
_RS16175
PFLU_RS16180: PFLU_RS16180 - hypothetical protein, at 3,675,246 to 3,675,695
_RS16180
PFLU_RS16185: PFLU_RS16185 - maltose alpha-D-glucosyltransferase, at 3,675,711 to 3,677,774
_RS16185
Group
Condition
PFLU
_RS16165
PFLU
_RS16170
PFLU
_RS16175
PFLU
_RS16180
PFLU
_RS16185
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.1
-0.5
-0.6
+0.1
carbon source
NAG (C); with MOPS
-0.2
-0.1
+0.3
-0.5
-0.2
carbon source
L-Arabinose (C)
-0.4
+0.1
-0.0
-0.4
-0.0
carbon source
L-Arabinose (C)
-0.3
-0.2
+0.0
+0.0
-0.1
carbon source
succinate (C); with MOPS
-0.1
+0.2
-0.1
-0.4
-0.0
carbon source
L-Arabinose (C)
-0.2
-0.0
+0.0
-0.3
+0.1
carbon source
D-Glucose (C)
-0.2
-0.1
-0.1
-0.2
+0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
+0.1
-0.3
+0.1
carbon source
D-Glucose (C)
-0.3
+0.2
+0.2
-0.2
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.1
-0.1
+0.1
carbon source
NAG (C)
+0.1
-0.2
-0.1
-0.2
+0.2
carbon source
succinate (C); with MOPS
+0.0
-0.1
+0.2
+0.0
-0.3
carbon source
NAG (C); with MOPS
-0.2
+0.2
+0.3
-0.4
-0.0
carbon source
acetate (C)
-0.2
+0.1
-0.2
-0.3
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.1
+0.1
-0.2
+0.1
carbon source
D,L-Lactate (C)
+0.0
+0.1
-0.3
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.1
-0.1
-0.2
+0.2
-0.1
carbon source
acetate (C)
+0.1
-0.1
-0.2
+0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.2
+0.2
-0.1
-0.1
carbon source
acetate (C)
+0.1
-0.1
+0.0
-0.1
+0.1
carbon source
succinate (C)
-0.3
+0.2
+0.1
+0.1
-0.0
carbon source
Trisodium citrate (C)
-0.1
+0.2
+0.1
-0.1
+0.0
carbon source
succinate (C)
-0.2
+0.1
+0.1
-0.1
+0.2
carbon source
NAG (C); with MOPS
-0.1
+0.2
+0.3
-0.2
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.2
+0.1
+0.0
carbon source
acetate (C)
+0.0
+0.3
-0.5
+0.3
+0.1
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.3
+0.1
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.0
-0.0
+0.3
+0.2
carbon source
D-Glucose (C); with MOPS
-0.1
+0.3
+0.3
-0.3
+0.0
carbon source
D-Glucose (C); with MOPS
+0.2
+0.3
+0.1
+0.0
-0.0
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