Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS16030 and PFLU_RS30855 are separated by 99 nucleotidesPFLU_RS30855 and PFLU_RS16040 overlap by 32 nucleotidesPFLU_RS16040 and PFLU_RS16045 are separated by 236 nucleotidesPFLU_RS16045 and PFLU_RS16050 are separated by 29 nucleotides PFLU_RS16030: PFLU_RS16030 - aldehyde dehydrogenase family protein, at 3,640,929 to 3,642,416 _RS16030 PFLU_RS30855: PFLU_RS30855 - MerR family transcriptional regulator, at 3,642,516 to 3,642,869 _RS30855 PFLU_RS16040: PFLU_RS16040 - NAD-dependent epimerase/dehydratase family protein, at 3,642,838 to 3,643,881 _RS16040 PFLU_RS16045: PFLU_RS16045 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 3,644,118 to 3,645,179 _RS16045 PFLU_RS16050: PFLU_RS16050 - oxidoreductase, at 3,645,209 to 3,646,159 _RS16050
Group Condition PFLU_RS16030 PFLU_RS30855 PFLU_RS16040 PFLU_RS16045 PFLU_RS16050
carbon source acetate (C) -0.3 -0.7 +0.3 -2.1 -0.5
carbon source acetate (C) -0.8 +0.2 +0.1 -0.5 -0.8
carbon source D,L-Lactate (C) -0.1 -0.3 +0.0 -1.1 -0.1
carbon source D-Xylose (C) -0.1 -0.7 -0.1 -0.3 -0.1
carbon source L-Arabinose (C) -0.4 -0.6 +0.2 -0.2 -0.2
carbon source succinate (C) +0.1 +0.2 -0.1 -1.0 -0.3
carbon source succinate (C); with MOPS +0.4 -0.7 +0.2 -1.0 +0.1
carbon source D-Glucose (C) +0.0 -0.9 +0.3 -0.3 -0.0
carbon source D-Glucose (C) -0.4 -0.3 -0.0 +0.1 -0.2
carbon source acetate (C) +0.0 -0.2 +0.2 -0.7 -0.1
carbon source D-Glucose (C); with MOPS -0.4 +0.5 +0.2 -0.4 -0.7
carbon source succinate (C); with MOPS -0.2 +0.4 -0.0 -0.3 -0.5
carbon source acetate (C) +0.2 -0.3 -0.0 -0.6 +0.0
carbon source NAG (C) +0.2 -0.4 +0.1 -0.2 -0.2
carbon source succinate (C) +0.3 -0.0 +0.1 +0.2 -1.0
carbon source Trisodium citrate (C) -0.0 +0.4 +0.1 -0.4 -0.4
carbon source Trisodium citrate (C) -0.6 +0.4 +0.1 -0.3 +0.1
carbon source NAG (C); with MOPS +0.1 +0.4 +0.2 -0.5 -0.4
carbon source D-Glucose (C); with MOPS +0.3 -0.1 +0.2 -0.1 -0.2
carbon source L-Arabinose (C); with MOPS +0.1 -0.3 +0.2 +0.2 -0.1
carbon source NAG (C); with MOPS +0.0 +0.5 +0.1 -0.5 +0.0
carbon source Trisodium citrate (C) +0.0 +0.6 +0.1 -0.3 -0.2
carbon source L-Arabinose (C) -0.2 +0.7 +0.1 +0.3 -0.7
carbon source Trisodium citrate (C); with MOPS -0.1 +0.2 +0.4 -0.2 +0.1
carbon source Trisodium citrate (C); with MOPS +0.3 +0.5 +0.1 -0.1 -0.2
carbon source D-Glucose (C); with MOPS +0.3 +0.2 +0.1 +0.2 -0.3
carbon source succinate (C); with MOPS +0.1 +0.3 +0.1 +0.4 -0.2
carbon source D-Glucose (C) +0.1 +0.8 +0.3 -0.2 -0.1
carbon source L-Arabinose (C); with MOPS +0.3 -0.5 +0.1 +0.9 +0.2
carbon source L-Arabinose (C) +0.2 +0.6 +0.4 +0.6 -0.3
remove
PFLU_RS16030
plot
remove
PFLU_RS30855
plot
remove
PFLU_RS16040
remove
PFLU_RS16045
plot
remove
PFLU_RS16050
plot