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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS31660 and PFLU_RS15960 are separated by 240 nucleotides
PFLU_RS15960 and PFLU_RS15965 are separated by 237 nucleotides
PFLU_RS15965 and PFLU_RS15970 are separated by 31 nucleotides
PFLU_RS15970 and PFLU_RS15975 are separated by 57 nucleotides
PFLU_RS31660: PFLU_RS31660 - helix-turn-helix domain-containing protein, at 3,626,214 to 3,626,309
_RS31660
PFLU_RS15960: PFLU_RS15960 - homoprotocatechuate degradation operon regulator HpaR, at 3,626,550 to 3,626,972
_RS15960
PFLU_RS15965: PFLU_RS15965 - FAD-binding oxidoreductase, at 3,627,210 to 3,628,508
_RS15965
PFLU_RS15970: PFLU_RS15970 - DUF861 domain-containing protein, at 3,628,540 to 3,628,905
_RS15970
PFLU_RS15975: PFLU_RS15975 - LuxR family transcriptional regulator, at 3,628,963 to 3,629,622
_RS15975
Group
Condition
PFLU
_RS31660
PFLU
_RS15960
PFLU
_RS15965
PFLU
_RS15970
PFLU
_RS15975
carbon source
succinate (C); with MOPS
N.D.
-1.0
-0.0
-1.2
-0.4
carbon source
acetate (C)
N.D.
-0.2
+0.1
-2.3
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
-0.4
+0.1
-1.9
-0.3
carbon source
D-Glucose (C); with MOPS
N.D.
-0.7
+0.0
-1.7
+0.1
carbon source
L-Arabinose (C)
N.D.
+0.1
-0.2
-2.0
-0.1
carbon source
succinate (C); with MOPS
N.D.
-0.4
-0.2
-0.9
-0.5
carbon source
D-Glucose (C); with MOPS
N.D.
+0.3
-0.4
-2.0
+0.1
carbon source
Trisodium citrate (C)
N.D.
+0.1
+0.0
-1.4
-0.4
carbon source
D-Glucose (C); with MOPS
N.D.
-0.9
-0.1
-0.4
-0.2
carbon source
NAG (C); with MOPS
N.D.
-0.1
+0.1
-1.2
-0.4
carbon source
NAG (C); with MOPS
N.D.
+0.2
-0.4
-1.5
+0.3
carbon source
succinate (C)
N.D.
-0.7
-0.2
-0.3
-0.2
carbon source
L-Arabinose (C); with MOPS
N.D.
-0.3
-0.2
-0.6
-0.3
carbon source
acetate (C)
N.D.
-0.2
+0.1
-1.2
-0.1
carbon source
Trisodium citrate (C)
N.D.
-0.4
-0.1
-0.4
-0.3
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.1
-0.1
-1.2
+0.1
carbon source
Trisodium citrate (C)
N.D.
-0.8
-0.1
-0.2
+0.1
carbon source
acetate (C)
N.D.
-0.3
+0.0
-0.6
-0.3
carbon source
succinate (C)
N.D.
-0.2
-0.3
-0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.2
-0.0
-0.7
-0.2
carbon source
succinate (C)
N.D.
-0.8
+0.2
+0.2
-0.3
carbon source
NAG (C); with MOPS
N.D.
+0.5
+0.1
-0.9
-0.3
carbon source
NAG (C)
N.D.
-0.7
+0.1
+0.2
-0.0
carbon source
D-Glucose (C)
N.D.
-0.7
-0.2
+0.4
+0.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.3
-0.2
-0.2
+0.4
carbon source
D-Xylose (C)
N.D.
+0.3
+0.1
-0.3
-0.3
carbon source
L-Arabinose (C)
N.D.
+0.4
+0.0
-1.0
+0.5
carbon source
D-Glucose (C)
N.D.
+0.5
+0.3
+0.4
-0.4
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.8
-0.1
+0.0
+0.2
carbon source
D,L-Lactate (C)
N.D.
+0.2
+0.1
+0.7
-0.2
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