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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS15695 and PFLU_RS15700 are separated by 34 nucleotides
PFLU_RS15700 and PFLU_RS15705 are separated by 46 nucleotides
PFLU_RS15705 and PFLU_RS15710 are separated by 54 nucleotides
PFLU_RS15710 and PFLU_RS15715 overlap by 4 nucleotides
PFLU_RS15695: PFLU_RS15695 - taurine catabolism dioxygenase TauD, at 3,532,191 to 3,533,237
_RS15695
PFLU_RS15700: PFLU_RS15700 - non-ribosomal peptide synthetase, at 3,533,272 to 3,536,283
_RS15700
PFLU_RS15705: PFLU_RS15705 - non-ribosomal peptide synthetase, at 3,536,330 to 3,550,240
_RS15705
PFLU_RS15710: PFLU_RS15710 - non-ribosomal peptide synthetase, at 3,550,295 to 3,560,359
_RS15710
PFLU_RS15715: PFLU_RS15715 - non-ribosomal peptide synthetase, at 3,560,356 to 3,564,102
_RS15715
Group
Condition
PFLU
_RS15695
PFLU
_RS15700
PFLU
_RS15705
PFLU
_RS15710
PFLU
_RS15715
carbon source
D-Xylose (C)
-0.1
-0.1
+0.0
-0.0
-0.1
carbon source
acetate (C)
+0.1
+0.0
-0.0
-0.1
-0.2
carbon source
L-Arabinose (C)
+0.1
-0.2
-0.2
-0.0
+0.2
carbon source
NAG (C)
-0.2
+0.1
+0.1
+0.1
-0.1
carbon source
NAG (C); with MOPS
-0.2
-0.0
+0.0
+0.1
+0.1
carbon source
Trisodium citrate (C)
-0.1
-0.1
-0.0
+0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.2
+0.0
+0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.0
+0.0
+0.1
+0.3
carbon source
succinate (C); with MOPS
-0.1
+0.1
+0.0
+0.2
+0.0
carbon source
NAG (C); with MOPS
+0.1
+0.0
+0.1
+0.1
-0.1
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
+0.1
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.2
-0.1
+0.0
+0.0
carbon source
L-Arabinose (C)
+0.0
+0.1
-0.1
+0.3
+0.0
carbon source
D-Glucose (C); with MOPS
-0.2
+0.0
+0.0
+0.2
+0.2
carbon source
D-Glucose (C)
+0.0
+0.1
+0.1
+0.2
-0.0
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
+0.1
+0.2
+0.1
carbon source
succinate (C)
+0.2
-0.1
+0.0
+0.2
+0.1
carbon source
succinate (C); with MOPS
+0.1
-0.0
-0.0
+0.2
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.1
+0.1
+0.1
+0.2
carbon source
succinate (C)
-0.0
-0.1
+0.1
+0.2
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.0
+0.2
+0.2
carbon source
acetate (C)
+0.1
-0.1
+0.2
+0.1
+0.2
carbon source
acetate (C)
-0.2
+0.2
-0.0
+0.3
+0.3
carbon source
D-Glucose (C)
+0.0
-0.0
+0.2
+0.2
+0.2
carbon source
L-Arabinose (C)
+0.2
+0.0
-0.0
+0.0
+0.3
carbon source
acetate (C)
+0.1
-0.1
+0.1
+0.1
+0.3
carbon source
D-Glucose (C)
+0.0
+0.0
+0.1
+0.3
+0.1
carbon source
NAG (C); with MOPS
-0.0
-0.0
+0.1
+0.2
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.2
+0.1
+0.1
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.2
+0.1
+0.2
+0.2
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