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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS15375 and PFLU_RS15380 are separated by 261 nucleotides
PFLU_RS15380 and PFLU_RS15385 are separated by 78 nucleotides
PFLU_RS15385 and PFLU_RS15390 are separated by 219 nucleotides
PFLU_RS15390 and PFLU_RS15395 are separated by 147 nucleotides
PFLU_RS15375: PFLU_RS15375 - helix-turn-helix domain-containing protein, at 3,446,586 to 3,447,395
_RS15375
PFLU_RS15380: PFLU_RS15380 - DUF1652 domain-containing protein, at 3,447,657 to 3,447,929
_RS15380
PFLU_RS15385: PFLU_RS15385 - helicase UvrD, at 3,448,008 to 3,450,455
_RS15385
PFLU_RS15390: PFLU_RS15390 - pirin family protein, at 3,450,675 to 3,451,370
_RS15390
PFLU_RS15395: PFLU_RS15395 - alpha-D-glucose phosphate-specific phosphoglucomutase, at 3,451,518 to 3,453,164
_RS15395
Group
Condition
PFLU
_RS15375
PFLU
_RS15380
PFLU
_RS15385
PFLU
_RS15390
PFLU
_RS15395
carbon source
NAG (C); with MOPS
+0.1
-0.7
-0.1
-0.0
-0.1
carbon source
NAG (C); with MOPS
-0.0
-0.8
-0.1
+0.0
+0.1
carbon source
succinate (C); with MOPS
-0.2
-0.2
-0.2
-0.1
+0.1
carbon source
D-Xylose (C)
+0.1
-0.4
+0.1
-0.1
-0.0
carbon source
succinate (C); with MOPS
+0.0
-0.4
-0.1
+0.0
+0.1
carbon source
Trisodium citrate (C)
-0.2
-0.0
-0.0
-0.1
+0.0
carbon source
D-Xylose (C)
-0.1
-0.2
+0.1
+0.1
+0.0
carbon source
succinate (C)
+0.0
-0.2
-0.2
-0.0
+0.3
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.2
+0.0
+0.2
carbon source
NAG (C)
+0.1
-0.2
+0.1
-0.1
-0.0
carbon source
D-Glucose (C); with MOPS
+0.2
-0.3
-0.1
+0.2
+0.0
carbon source
succinate (C)
+0.0
-0.1
-0.0
+0.0
+0.2
carbon source
acetate (C)
+0.2
+0.3
+0.0
-0.3
-0.1
carbon source
D-Glucose (C)
-0.0
-0.1
-0.1
+0.1
+0.3
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.3
-0.1
-0.1
+0.0
carbon source
succinate (C); with MOPS
-0.1
+0.3
-0.2
+0.0
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.4
-0.2
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.1
+0.1
+0.1
carbon source
L-Arabinose (C)
+0.2
+0.5
-0.2
-0.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.2
-0.1
+0.2
+0.1
carbon source
D,L-Lactate (C)
+0.2
+0.1
-0.1
-0.1
+0.2
carbon source
acetate (C)
+0.1
+0.2
-0.2
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.1
+0.0
+0.0
+0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
-0.0
+0.1
+0.2
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.1
+0.1
+0.2
carbon source
D-Glucose (C); with MOPS
+0.0
+0.3
+0.1
+0.1
+0.0
carbon source
succinate (C)
+0.1
+0.4
+0.1
-0.1
+0.1
carbon source
L-Arabinose (C)
+0.0
+0.4
+0.0
+0.1
-0.0
carbon source
NAG (C); with MOPS
+0.0
+0.4
-0.0
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.4
-0.0
+0.3
+0.1
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