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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS15050 and PFLU_RS15055 are separated by 27 nucleotides
PFLU_RS15055 and PFLU_RS15060 are separated by 11 nucleotides
PFLU_RS15060 and PFLU_RS15065 are separated by 237 nucleotides
PFLU_RS15065 and PFLU_RS15070 are separated by 10 nucleotides
PFLU_RS15050: PFLU_RS15050 - SDR family oxidoreductase, at 3,364,593 to 3,365,387
_RS15050
PFLU_RS15055: PFLU_RS15055 - aldehyde dehydrogenase family protein, at 3,365,415 to 3,366,905
_RS15055
PFLU_RS15060: PFLU_RS15060 - acetolactate synthase large subunit, at 3,366,917 to 3,368,458
_RS15060
PFLU_RS15065: PFLU_RS15065 - IclR family transcriptional regulator, at 3,368,696 to 3,369,454
_RS15065
PFLU_RS15070: PFLU_RS15070 - hypothetical protein, at 3,369,465 to 3,370,664
_RS15070
Group
Condition
PFLU
_RS15050
PFLU
_RS15055
PFLU
_RS15060
PFLU
_RS15065
PFLU
_RS15070
carbon source
NAG (C)
-1.1
-0.4
+0.1
-3.5
-0.1
carbon source
NAG (C); with MOPS
-0.3
-0.4
-0.2
-4.1
+0.3
carbon source
NAG (C); with MOPS
-0.6
+0.0
-0.2
-3.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-1.3
+0.1
-0.1
-1.0
-0.3
carbon source
NAG (C)
-0.7
-0.1
-0.1
-1.9
+0.1
carbon source
NAG (C); with MOPS
-0.1
-0.1
-0.4
-1.8
+0.3
carbon source
acetate (C)
+0.8
-0.3
+0.9
-3.4
+0.3
carbon source
D,L-Lactate (C)
-1.2
-0.2
+0.2
-0.4
+0.1
carbon source
Trisodium citrate (C)
-0.9
-0.2
-0.1
-0.2
-0.1
carbon source
L-Arabinose (C)
-1.5
-0.2
+0.6
-0.5
+0.3
carbon source
D-Glucose (C)
-0.6
-0.2
-0.2
-0.3
+0.1
carbon source
acetate (C)
-0.1
-0.1
-0.0
-1.0
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.6
+0.3
+0.4
-1.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.2
+0.0
-0.3
-0.2
carbon source
D-Glucose (C)
-0.7
-0.0
-0.1
+0.1
-0.1
carbon source
D-Xylose (C)
-0.5
+0.0
+0.2
-0.6
+0.0
carbon source
D,L-Lactate (C)
-0.8
-0.0
+0.1
-0.1
+0.0
carbon source
acetate (C)
+0.2
-0.3
+0.1
-0.6
+0.0
carbon source
D-Glucose (C); with MOPS
+0.1
-0.2
+0.2
-0.9
+0.0
carbon source
Trisodium citrate (C)
-0.3
-0.2
-0.1
-0.1
+0.2
carbon source
acetate (C)
+0.7
-0.2
+0.2
-1.3
+0.0
carbon source
succinate (C)
-0.1
+0.1
-0.4
-0.3
+0.2
carbon source
acetate (C)
-0.5
-0.0
+0.1
+0.2
-0.2
carbon source
D-Xylose (C)
+0.2
-0.2
+0.1
-0.5
+0.2
carbon source
L-Arabinose (C)
+0.6
+0.1
+0.0
-0.1
-0.4
carbon source
succinate (C); with MOPS
+0.5
-0.1
+0.0
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.6
-0.2
-0.1
+0.1
-0.1
carbon source
succinate (C); with MOPS
-0.2
+0.0
+0.4
+0.3
+0.0
carbon source
succinate (C); with MOPS
+0.5
-0.0
-0.1
+0.4
+0.1
carbon source
Trisodium citrate (C)
+1.0
-0.1
+0.2
-0.0
-0.0
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