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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS14935 and PFLU_RS14940 are separated by 44 nucleotides
PFLU_RS14940 and PFLU_RS14945 are separated by 165 nucleotides
PFLU_RS14945 and PFLU_RS14950 are separated by 232 nucleotides
PFLU_RS14950 and PFLU_RS14955 are separated by 73 nucleotides
PFLU_RS14935: PFLU_RS14935 - dicarboxylate/amino acid:cation symporter, at 3,341,828 to 3,343,159
_RS14935
PFLU_RS14940: PFLU_RS14940 - 4-oxalomesaconate tautomerase, at 3,343,204 to 3,344,286
_RS14940
PFLU_RS14945: PFLU_RS14945 - LysR family transcriptional regulator, at 3,344,452 to 3,345,342
_RS14945
PFLU_RS14950: PFLU_RS14950 - glutamine synthetase, at 3,345,575 to 3,346,942
_RS14950
PFLU_RS14955: PFLU_RS14955 - aspartate aminotransferase family protein, at 3,347,016 to 3,348,413
_RS14955
Group
Condition
PFLU
_RS14935
PFLU
_RS14940
PFLU
_RS14945
PFLU
_RS14950
PFLU
_RS14955
carbon source
acetate (C)
-0.3
-0.8
-0.3
+0.0
-0.4
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.1
-0.6
-0.2
+0.0
carbon source
D-Glucose (C)
-0.2
-0.2
-0.0
-0.3
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.6
-0.1
+0.2
-0.3
carbon source
D-Glucose (C)
-0.5
-0.0
-0.0
-0.0
-0.3
carbon source
succinate (C)
-0.4
-0.2
-0.1
-0.0
-0.1
carbon source
succinate (C); with MOPS
-0.2
-0.2
-0.0
-0.0
-0.2
carbon source
succinate (C); with MOPS
-0.1
-0.3
+0.0
-0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
-0.5
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.0
-0.5
-0.0
+0.0
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.2
-0.0
-0.0
carbon source
D-Glucose (C)
-0.1
-0.2
+0.0
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.3
-0.1
-0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
-0.1
-0.2
-0.2
+0.0
-0.1
carbon source
D-Xylose (C)
-0.2
-0.0
-0.1
-0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.1
-0.2
+0.0
-0.0
carbon source
NAG (C); with MOPS
-0.3
-0.3
-0.0
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.2
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.3
+0.0
-0.0
-0.1
+0.0
carbon source
acetate (C)
+0.3
-0.3
-0.1
-0.3
-0.0
carbon source
NAG (C); with MOPS
-0.1
-0.2
+0.1
+0.0
-0.1
carbon source
L-Arabinose (C)
-0.2
+0.1
-0.3
+0.1
+0.2
carbon source
acetate (C)
-0.0
+0.1
-0.2
+0.3
-0.3
carbon source
L-Arabinose (C)
-0.4
-0.1
+0.3
+0.3
-0.2
carbon source
NAG (C); with MOPS
-0.2
-0.1
-0.1
+0.3
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
-0.1
+0.1
-0.0
carbon source
L-Arabinose (C)
+0.1
-0.2
+0.1
-0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.1
+0.2
-0.1
+0.0
carbon source
D,L-Lactate (C)
+0.2
+0.1
-0.1
-0.1
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.0
-0.1
+0.3
+0.1
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