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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS14455 and PFLU_RS14460 are separated by 143 nucleotides
PFLU_RS14460 and PFLU_RS14465 are separated by 69 nucleotides
PFLU_RS14465 and PFLU_RS14470 are separated by 124 nucleotides
PFLU_RS14470 and PFLU_RS14475 are separated by 78 nucleotides
PFLU_RS14455: PFLU_RS14455 - hypothetical protein, at 3,237,117 to 3,237,470
_RS14455
PFLU_RS14460: PFLU_RS14460 - DUF1275 domain-containing protein, at 3,237,614 to 3,238,318
_RS14460
PFLU_RS14465: PFLU_RS14465 - ABC-F family ATP-binding cassette domain-containing protein, at 3,238,388 to 3,240,010
_RS14465
PFLU_RS14470: PFLU_RS14470 - DNA topoisomerase IB, at 3,240,135 to 3,241,172
_RS14470
PFLU_RS14475: PFLU_RS14475 - molybdenum ABC transporter ATP-binding protein, at 3,241,251 to 3,242,330
_RS14475
Group
Condition
PFLU
_RS14455
PFLU
_RS14460
PFLU
_RS14465
PFLU
_RS14470
PFLU
_RS14475
carbon source
L-Arabinose (C)
-0.2
-0.9
-0.0
-0.2
-0.5
carbon source
acetate (C)
-0.2
+0.0
-0.0
-0.3
-1.3
carbon source
NAG (C); with MOPS
+0.2
-0.8
+0.1
-0.3
-0.5
carbon source
succinate (C)
+0.3
-0.2
-0.2
-0.2
-0.9
carbon source
succinate (C); with MOPS
-0.0
-0.3
-0.1
-0.3
-0.3
carbon source
L-Arabinose (C)
+0.2
-0.9
-0.0
-0.4
+0.1
carbon source
NAG (C); with MOPS
+0.1
-0.3
+0.2
-0.2
-0.6
carbon source
acetate (C)
+0.1
-0.3
+0.1
+0.6
-1.3
carbon source
L-Arabinose (C)
-0.0
-0.2
+0.2
-0.2
-0.6
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.2
-0.1
-0.1
-0.4
carbon source
NAG (C); with MOPS
+0.0
+0.0
+0.0
-0.4
-0.4
carbon source
D,L-Lactate (C)
-0.1
-0.0
+0.0
-0.0
-0.4
carbon source
acetate (C)
-0.1
-0.2
+0.4
+0.3
-0.9
carbon source
Trisodium citrate (C)
+0.2
-0.2
-0.1
-0.2
-0.3
carbon source
D-Glucose (C); with MOPS
-0.2
-0.2
+0.2
-0.1
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.5
-0.2
-0.0
-0.0
carbon source
D-Glucose (C)
-0.2
+0.1
-0.1
-0.0
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.4
-0.1
-0.0
-0.2
-0.4
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
+0.0
+0.2
-0.4
carbon source
D-Glucose (C)
+0.1
-0.2
-0.2
+0.1
-0.2
carbon source
Trisodium citrate (C)
+0.1
+0.0
+0.1
-0.0
-0.6
carbon source
succinate (C)
-0.1
-0.4
+0.1
+0.1
-0.0
carbon source
succinate (C); with MOPS
+0.1
-0.3
+0.2
-0.2
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.1
-0.0
-0.1
-0.1
carbon source
succinate (C); with MOPS
+0.1
-0.1
+0.2
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.0
-0.0
-0.4
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.1
+0.3
-0.2
-0.2
carbon source
acetate (C)
+0.2
-0.1
+0.0
+0.1
-0.1
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
-0.0
-0.2
carbon source
NAG (C)
+0.1
+0.3
-0.0
+0.2
-0.2
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