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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS13555 and PFLU_RS13560 overlap by 33 nucleotides
PFLU_RS13560 and PFLU_RS13565 are separated by 183 nucleotides
PFLU_RS13565 and PFLU_RS13570 are separated by 148 nucleotides
PFLU_RS13570 and PFLU_RS13575 are separated by 168 nucleotides
PFLU_RS13555: PFLU_RS13555 - NAD(+) diphosphatase, at 3,069,190 to 3,070,023
_RS13555
PFLU_RS13560: PFLU_RS13560 - TSUP family transporter, at 3,069,991 to 3,070,770
_RS13560
PFLU_RS13565: PFLU_RS13565 - phosphatidylcholine synthase, at 3,070,954 to 3,071,670
_RS13565
PFLU_RS13570: PFLU_RS13570 - methyltransferase, at 3,071,819 to 3,072,733
_RS13570
PFLU_RS13575: PFLU_RS13575 - DUF1289 domain-containing protein, at 3,072,902 to 3,073,390
_RS13575
Group
Condition
PFLU
_RS13555
PFLU
_RS13560
PFLU
_RS13565
PFLU
_RS13570
PFLU
_RS13575
carbon source
acetate (C)
-0.7
+0.0
-0.0
-0.1
-0.1
carbon source
acetate (C)
+0.0
-0.4
+0.0
+0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.3
+0.1
+0.1
-0.3
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.0
-0.1
-0.2
carbon source
succinate (C); with MOPS
+0.1
-0.3
-0.1
+0.1
+0.1
carbon source
acetate (C)
-0.2
+0.3
+0.0
+0.0
-0.3
carbon source
D-Glucose (C); with MOPS
+0.0
+0.2
-0.1
+0.0
-0.3
carbon source
D-Xylose (C)
+0.1
-0.3
+0.1
-0.1
+0.0
carbon source
NAG (C)
+0.2
-0.3
-0.0
-0.0
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.0
+0.1
+0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.0
-0.2
+0.2
-0.3
carbon source
NAG (C)
+0.2
-0.3
-0.0
-0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.6
+0.0
+0.3
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.1
+0.0
+0.0
-0.2
carbon source
D-Glucose (C)
+0.2
+0.1
+0.0
+0.1
-0.2
carbon source
D,L-Lactate (C)
+0.0
-0.2
+0.1
+0.1
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.4
-0.0
-0.0
-0.1
carbon source
L-Arabinose (C)
+0.2
-0.1
+0.2
+0.0
-0.1
carbon source
acetate (C)
-0.1
+0.5
-0.4
+0.1
+0.1
carbon source
D-Glucose (C)
-0.2
+0.1
+0.2
+0.1
+0.0
carbon source
succinate (C); with MOPS
-0.0
-0.1
+0.1
-0.0
+0.3
carbon source
succinate (C)
-0.1
+0.0
+0.1
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.1
+0.1
+0.3
+0.1
carbon source
D-Glucose (C)
+0.2
+0.5
-0.1
-0.0
-0.0
carbon source
succinate (C)
+0.2
+0.2
+0.0
+0.0
+0.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.1
+0.1
+0.4
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.2
+0.1
+0.2
+0.2
carbon source
NAG (C); with MOPS
+0.1
+0.5
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.2
+0.4
-0.0
+0.2
+0.2
carbon source
NAG (C); with MOPS
+0.0
+0.3
+0.2
+0.2
+0.3
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