Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS13305 and PFLU_RS13310 are separated by 50 nucleotides
PFLU_RS13310 and PFLU_RS13315 are separated by 138 nucleotides
PFLU_RS13315 and PFLU_RS13320 are separated by 91 nucleotides
PFLU_RS13320 and PFLU_RS13325 are separated by 277 nucleotides
PFLU_RS13305: PFLU_RS13305 - sigma-70 family RNA polymerase sigma factor, at 3,009,076 to 3,009,591
_RS13305
PFLU_RS13310: PFLU_RS13310 - DUF3455 domain-containing protein, at 3,009,642 to 3,010,163
_RS13310
PFLU_RS13315: PFLU_RS13315 - class I SAM-dependent methyltransferase, at 3,010,302 to 3,011,072
_RS13315
PFLU_RS13320: PFLU_RS13320 - sulfite exporter TauE/SafE family protein, at 3,011,164 to 3,011,949
_RS13320
PFLU_RS13325: PFLU_RS13325 - acyl-CoA dehydrogenase family protein, at 3,012,227 to 3,013,468
_RS13325
Group
Condition
PFLU
_RS13305
PFLU
_RS13310
PFLU
_RS13315
PFLU
_RS13320
PFLU
_RS13325
carbon source
D-Glucose (C); with MOPS
-0.2
-0.4
-0.4
-0.2
-0.1
carbon source
NAG (C); with MOPS
-0.0
-0.9
-0.0
+0.1
-0.3
carbon source
acetate (C)
-0.3
+0.2
-0.6
-0.2
-0.0
carbon source
NAG (C); with MOPS
-0.2
-0.4
-0.1
-0.0
-0.2
carbon source
D,L-Lactate (C)
-0.1
-0.1
-0.5
-0.2
-0.0
carbon source
NAG (C)
+0.0
-0.2
-0.5
-0.1
+0.1
carbon source
acetate (C)
-0.1
-0.4
-0.0
-0.1
-0.0
carbon source
D-Xylose (C)
-0.3
-0.1
-0.2
+0.1
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.3
+0.1
-0.1
-0.2
+0.0
carbon source
succinate (C)
-0.0
-0.2
-0.3
+0.1
-0.2
carbon source
L-Arabinose (C)
-0.6
+0.1
-0.3
+0.1
+0.2
carbon source
D-Glucose (C)
-0.0
-0.2
-0.4
-0.1
+0.2
carbon source
Trisodium citrate (C)
-0.0
-0.3
-0.3
-0.1
+0.2
carbon source
acetate (C)
-0.1
+0.3
-0.4
-0.2
-0.0
carbon source
NAG (C); with MOPS
+0.0
-0.4
+0.1
-0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.4
-0.3
+0.1
-0.3
-0.3
carbon source
D,L-Lactate (C)
-0.1
-0.1
-0.2
-0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.1
-0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.0
-0.3
+0.1
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
-0.2
+0.1
+0.2
carbon source
succinate (C); with MOPS
+0.4
+0.2
-0.3
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.0
-0.3
+0.2
+0.2
-0.1
carbon source
D-Glucose (C); with MOPS
+0.3
+0.0
+0.1
-0.3
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.1
+0.4
-0.3
+0.2
carbon source
succinate (C); with MOPS
+0.0
-0.3
+0.3
-0.1
+0.3
carbon source
succinate (C)
+0.1
-0.2
+0.2
+0.2
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.1
+0.2
+0.3
carbon source
acetate (C)
-0.1
+0.3
+0.5
-0.0
-0.1
carbon source
succinate (C)
+0.1
+0.3
+0.3
+0.1
-0.3
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.2
+0.6
+0.0
+0.0
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