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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS13185 and PFLU_RS13190 are separated by 329 nucleotides
PFLU_RS13190 and PFLU_RS13195 are separated by 161 nucleotides
PFLU_RS13195 and PFLU_RS13200 are separated by 206 nucleotides
PFLU_RS13200 and PFLU_RS13205 are separated by 50 nucleotides
PFLU_RS13185: PFLU_RS13185 - hypothetical protein, at 2,978,839 to 2,979,288
_RS13185
PFLU_RS13190: PFLU_RS13190 - FecR family protein, at 2,979,618 to 2,980,613
_RS13190
PFLU_RS13195: PFLU_RS13195 - hypothetical protein, at 2,980,775 to 2,985,862
_RS13195
PFLU_RS13200: PFLU_RS13200 - Ldh family oxidoreductase, at 2,986,069 to 2,987,106
_RS13200
PFLU_RS13205: PFLU_RS13205 - DUF883 family protein, at 2,987,157 to 2,987,477
_RS13205
Group
Condition
PFLU
_RS13185
PFLU
_RS13190
PFLU
_RS13195
PFLU
_RS13200
PFLU
_RS13205
carbon source
acetate (C)
+0.1
-0.2
+0.1
-2.0
-1.0
carbon source
L-Arabinose (C)
-0.4
+0.0
-0.3
-2.2
+0.0
carbon source
succinate (C)
-0.0
-0.0
+0.1
-2.0
-0.6
carbon source
NAG (C); with MOPS
-0.0
-0.2
-0.1
-2.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.0
-0.0
-2.2
-0.3
carbon source
D-Glucose (C)
+0.1
+0.0
-0.1
-1.4
-0.9
carbon source
acetate (C)
-0.4
+0.1
+0.0
-1.0
-0.6
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.0
-1.6
-0.3
carbon source
L-Arabinose (C)
-0.0
+0.1
-0.0
-1.8
+0.2
carbon source
succinate (C); with MOPS
-0.0
+0.0
+0.0
-1.3
-0.2
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
+0.0
-1.1
-0.3
carbon source
NAG (C); with MOPS
+0.0
-0.0
-0.1
-1.2
-0.3
carbon source
D-Glucose (C)
+0.1
+0.2
-0.0
-1.4
-0.3
carbon source
D-Glucose (C); with MOPS
-0.4
-0.0
+0.0
-0.7
-0.2
carbon source
D-Glucose (C); with MOPS
+0.0
-0.0
+0.1
-1.1
-0.3
carbon source
succinate (C); with MOPS
-0.0
+0.0
-0.0
-1.3
+0.0
carbon source
acetate (C)
+0.1
-0.2
-0.1
-1.3
+0.2
carbon source
Trisodium citrate (C)
-0.2
+0.1
+0.0
-1.4
+0.2
carbon source
succinate (C)
-0.0
+0.1
+0.1
-1.4
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.1
+0.1
-1.2
+0.1
carbon source
NAG (C)
+0.1
-0.2
-0.1
-1.0
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.2
-0.0
-0.8
+0.1
carbon source
D,L-Lactate (C)
+0.1
+0.1
-0.0
-0.7
-0.2
carbon source
D-Xylose (C)
+0.1
-0.0
+0.0
-0.9
+0.0
carbon source
D-Glucose (C)
+0.1
-0.1
+0.0
-0.2
-0.6
carbon source
acetate (C)
-0.1
-0.0
+0.0
+0.8
-1.4
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.1
-0.1
-0.9
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.2
+0.0
+0.3
-0.3
carbon source
NAG (C)
+0.3
-0.1
+0.0
-0.6
+0.4
carbon source
NAG (C); with MOPS
+0.5
+0.1
-0.1
+0.7
-0.6
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