Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS13165 and PFLU_RS13170 are separated by 39 nucleotides
PFLU_RS13170 and PFLU_RS13175 are separated by 75 nucleotides
PFLU_RS13175 and PFLU_RS13180 are separated by 67 nucleotides
PFLU_RS13180 and PFLU_RS13185 overlap by 1 nucleotides
PFLU_RS13165: PFLU_RS13165 - hypothetical protein, at 2,975,935 to 2,976,681
_RS13165
PFLU_RS13170: PFLU_RS13170 - C39 family peptidase, at 2,976,721 to 2,977,401
_RS13170
PFLU_RS13175: PFLU_RS13175 - hypothetical protein, at 2,977,477 to 2,978,220
_RS13175
PFLU_RS13180: PFLU_RS13180 - hypothetical protein, at 2,978,288 to 2,978,839
_RS13180
PFLU_RS13185: PFLU_RS13185 - hypothetical protein, at 2,978,839 to 2,979,288
_RS13185
Group
Condition
PFLU
_RS13165
PFLU
_RS13170
PFLU
_RS13175
PFLU
_RS13180
PFLU
_RS13185
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.0
-0.5
-0.3
-0.2
carbon source
D-Glucose (C); with MOPS
+0.0
-0.5
-0.1
-0.1
-0.4
carbon source
succinate (C); with MOPS
-0.3
-0.1
+0.3
-0.6
-0.1
carbon source
L-Arabinose (C)
+0.2
-0.3
-0.2
-0.3
-0.0
carbon source
D-Glucose (C); with MOPS
-0.3
-0.2
+0.2
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.1
-0.2
-0.1
-0.2
-0.1
carbon source
D-Glucose (C); with MOPS
+0.3
-0.1
+0.2
-0.6
-0.1
carbon source
acetate (C)
+0.0
-0.2
-0.1
-0.2
+0.1
carbon source
succinate (C); with MOPS
+0.2
-0.5
+0.1
-0.2
-0.0
carbon source
D-Glucose (C)
-0.1
-0.4
+0.2
-0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.3
+0.0
+0.1
-0.2
carbon source
succinate (C); with MOPS
+0.0
-0.3
-0.3
+0.3
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.3
+0.3
-0.3
-0.1
carbon source
succinate (C)
+0.2
-0.2
+0.1
-0.2
-0.1
carbon source
L-Arabinose (C)
+0.5
+0.4
+0.1
-0.6
-0.4
carbon source
D-Glucose (C)
+0.0
-0.0
+0.1
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.0
-0.1
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.1
-0.0
+0.2
+0.2
-0.2
carbon source
Trisodium citrate (C)
+0.3
-0.2
-0.1
+0.1
-0.0
carbon source
acetate (C)
+0.3
-0.3
+0.1
+0.4
-0.4
carbon source
D,L-Lactate (C)
-0.1
-0.1
+0.2
+0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.0
-0.1
+0.1
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.2
-0.2
+0.4
+0.0
carbon source
NAG (C); with MOPS
-0.0
-0.2
+0.2
+0.1
+0.5
carbon source
D-Xylose (C)
-0.1
+0.2
+0.2
+0.2
+0.1
carbon source
acetate (C)
-0.2
-0.1
+0.3
+0.7
-0.1
carbon source
NAG (C)
+0.1
-0.0
+0.3
+0.2
+0.1
carbon source
D-Xylose (C)
+0.2
+0.1
+0.1
+0.2
+0.1
carbon source
NAG (C)
+0.1
+0.2
+0.2
+0.4
+0.3
carbon source
NAG (C); with MOPS
-0.1
+0.2
+0.4
+0.8
-0.0
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