Fitness for 5 genes in Pseudomonas fluorescens SBW25

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPFLU_RS12860 and PFLU_RS12865 overlap by 4 nucleotidesPFLU_RS12865 and PFLU_RS12870 overlap by 1 nucleotidesPFLU_RS12870 and PFLU_RS12875 are separated by 130 nucleotidesPFLU_RS12875 and PFLU_RS12880 are separated by 341 nucleotides PFLU_RS12860: PFLU_RS12860 - ABC transporter permease, at 2,902,151 to 2,903,176 _RS12860 PFLU_RS12865: PFLU_RS12865 - microcin C ABC transporter permease YejB, at 2,903,173 to 2,904,234 _RS12865 PFLU_RS12870: PFLU_RS12870 - ABC transporter substrate-binding protein, at 2,904,234 to 2,906,093 _RS12870 PFLU_RS12875: PFLU_RS12875 - peptidyl-prolyl cis-trans isomerase, at 2,906,224 to 2,906,505 _RS12875 PFLU_RS12880: PFLU_RS12880 - ABC transporter ATP-binding protein, at 2,906,847 to 2,908,460 _RS12880
Group Condition PFLU_RS12860 PFLU_RS12865 PFLU_RS12870 PFLU_RS12875 PFLU_RS12880
carbon source acetate (C) -0.2 -0.1 -0.1 N.D. -0.1
carbon source acetate (C) -0.2 -0.2 +0.3 N.D. -0.4
carbon source acetate (C) -0.2 -0.2 -0.0 N.D. +0.0
carbon source L-Arabinose (C) +0.3 -0.3 +0.0 N.D. -0.1
carbon source L-Arabinose (C); with MOPS -0.1 -0.2 +0.2 N.D. +0.0
carbon source D-Xylose (C) +0.1 +0.1 -0.1 N.D. -0.1
carbon source NAG (C); with MOPS +0.0 -0.2 +0.1 N.D. +0.2
carbon source succinate (C) +0.1 -0.2 +0.1 N.D. +0.2
carbon source succinate (C); with MOPS +0.2 -0.2 +0.1 N.D. +0.2
carbon source NAG (C); with MOPS +0.1 -0.1 +0.1 N.D. +0.2
carbon source L-Arabinose (C); with MOPS +0.0 -0.1 +0.0 N.D. +0.3
carbon source NAG (C) -0.1 +0.1 +0.0 N.D. +0.2
carbon source L-Arabinose (C) +0.1 +0.0 +0.1 N.D. +0.1
carbon source D-Glucose (C); with MOPS +0.3 +0.1 +0.1 N.D. -0.2
carbon source D-Glucose (C) -0.1 +0.0 +0.2 N.D. +0.2
carbon source Trisodium citrate (C); with MOPS +0.2 +0.2 +0.0 N.D. -0.0
carbon source D-Glucose (C) -0.0 +0.0 +0.1 N.D. +0.4
carbon source Trisodium citrate (C) +0.3 +0.2 +0.1 N.D. +0.0
carbon source Trisodium citrate (C); with MOPS -0.0 +0.1 +0.2 N.D. +0.3
carbon source D-Glucose (C); with MOPS +0.1 +0.0 +0.2 N.D. +0.3
carbon source acetate (C) +0.6 -0.1 +0.1 N.D. -0.1
carbon source succinate (C) +0.1 +0.2 +0.1 N.D. +0.3
carbon source Trisodium citrate (C) -0.1 +0.4 +0.1 N.D. +0.3
carbon source Trisodium citrate (C) +0.1 +0.2 +0.1 N.D. +0.2
carbon source Trisodium citrate (C); with MOPS +0.1 +0.0 +0.1 N.D. +0.5
carbon source succinate (C); with MOPS +0.1 -0.0 +0.2 N.D. +0.4
carbon source NAG (C); with MOPS +0.3 +0.1 +0.1 N.D. +0.2
carbon source D-Glucose (C); with MOPS +0.5 +0.1 +0.1 N.D. +0.2
carbon source L-Arabinose (C); with MOPS +0.4 +0.2 +0.0 N.D. +0.4
carbon source acetate (C) +0.3 +0.4 +0.2 N.D. +0.0
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