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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS12090 and PFLU_RS12095 are separated by 14 nucleotides
PFLU_RS12095 and PFLU_RS12100 are separated by 155 nucleotides
PFLU_RS12100 and PFLU_RS12105 are separated by 210 nucleotides
PFLU_RS12105 and PFLU_RS12110 are separated by 19 nucleotides
PFLU_RS12090: PFLU_RS12090 - purine nucleoside permease, at 2,684,981 to 2,686,024
_RS12090
PFLU_RS12095: PFLU_RS12095 - nucleoside-specific channel-forming protein Tsx, at 2,686,039 to 2,686,986
_RS12095
PFLU_RS12100: PFLU_RS12100 - AraC family transcriptional regulator, at 2,687,142 to 2,688,080
_RS12100
PFLU_RS12105: PFLU_RS12105 - sugar ABC transporter substrate-binding protein, at 2,688,291 to 2,689,601
_RS12105
PFLU_RS12110: PFLU_RS12110 - L-iditol 2-dehydrogenase, at 2,689,621 to 2,690,394
_RS12110
Group
Condition
PFLU
_RS12090
PFLU
_RS12095
PFLU
_RS12100
PFLU
_RS12105
PFLU
_RS12110
carbon source
L-Arabinose (C)
-0.4
-0.2
+0.3
-0.2
-1.0
carbon source
L-Arabinose (C); with MOPS
-0.4
-0.2
-0.0
+0.1
-0.4
carbon source
succinate (C)
+0.0
-0.3
-0.3
-0.1
-0.1
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.4
-0.0
-0.2
carbon source
NAG (C); with MOPS
-0.5
-0.1
+0.2
-0.3
+0.0
carbon source
acetate (C)
-0.5
-0.1
+0.4
-0.1
-0.2
carbon source
NAG (C)
-0.1
-0.0
-0.2
-0.1
-0.1
carbon source
NAG (C)
-0.1
-0.0
-0.2
-0.0
-0.2
carbon source
D,L-Lactate (C)
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
D-Xylose (C)
+0.1
+0.0
-0.3
-0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.3
-0.1
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.1
+0.0
-0.4
+0.0
-0.2
carbon source
L-Arabinose (C)
-0.3
+0.0
+0.2
-0.1
-0.2
carbon source
Trisodium citrate (C)
-0.2
-0.2
+0.2
-0.1
-0.1
carbon source
succinate (C)
+0.1
-0.1
-0.1
-0.2
-0.0
carbon source
D-Glucose (C)
-0.2
-0.2
+0.3
+0.0
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
-0.1
+0.2
+0.1
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.1
+0.1
+0.1
-0.3
carbon source
L-Arabinose (C)
-0.3
+0.1
-0.1
-0.0
+0.0
carbon source
D-Glucose (C); with MOPS
-0.3
+0.0
+0.0
+0.1
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
+0.2
-0.0
-0.2
carbon source
D-Glucose (C)
-0.0
-0.1
+0.1
-0.2
+0.0
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.1
+0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.5
-0.1
+0.3
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
+0.3
-0.0
-0.2
carbon source
D-Glucose (C); with MOPS
-0.1
-0.0
+0.2
-0.1
+0.2
carbon source
acetate (C)
-0.1
+0.1
+0.4
-0.3
+0.2
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.4
+0.1
-0.0
carbon source
acetate (C)
-0.0
+0.2
-0.2
-0.1
+0.4
carbon source
succinate (C)
+0.0
+0.0
+0.4
-0.0
+0.2
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