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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11920 and PFLU_RS11925 are separated by 24 nucleotides
PFLU_RS11925 and PFLU_RS11930 are separated by 11 nucleotides
PFLU_RS11930 and PFLU_RS11935 are separated by 3 nucleotides
PFLU_RS11935 and PFLU_RS11940 are separated by 41 nucleotides
PFLU_RS11920: PFLU_RS11920 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 2,652,459 to 2,654,042
_RS11920
PFLU_RS11925: PFLU_RS11925 - MotA/TolQ/ExbB proton channel family protein, at 2,654,067 to 2,655,866
_RS11925
PFLU_RS11930: PFLU_RS11930 - biopolymer transporter ExbD, at 2,655,878 to 2,656,303
_RS11930
PFLU_RS11935: PFLU_RS11935 - energy transducer TonB, at 2,656,307 to 2,657,011
_RS11935
PFLU_RS11940: PFLU_RS11940 - membrane protein, at 2,657,053 to 2,658,753
_RS11940
Group
Condition
PFLU
_RS11920
PFLU
_RS11925
PFLU
_RS11930
PFLU
_RS11935
PFLU
_RS11940
carbon source
L-Arabinose (C)
-0.4
-0.3
-1.4
-0.2
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.2
-0.7
-0.5
-0.1
carbon source
D-Glucose (C)
-0.1
+0.0
-0.3
-0.6
-0.1
carbon source
succinate (C); with MOPS
-0.0
+0.0
-0.6
-0.4
-0.0
carbon source
L-Arabinose (C)
+0.1
-0.0
-0.6
-0.3
-0.0
carbon source
succinate (C)
-0.0
-0.0
-0.7
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.1
-0.5
+0.1
-0.1
carbon source
D-Xylose (C)
-0.1
-0.4
+0.0
-0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.4
-1.2
+0.0
+0.1
carbon source
D-Glucose (C)
-0.0
+0.0
-0.3
-0.3
+0.0
carbon source
acetate (C)
+0.0
+0.0
-0.3
-0.2
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.4
-0.3
+0.4
carbon source
L-Arabinose (C)
+0.1
+0.2
-0.5
+0.0
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.3
-0.5
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.3
-0.2
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.3
+0.1
-0.1
+0.2
carbon source
NAG (C); with MOPS
+0.1
+0.5
-0.3
-0.2
-0.0
carbon source
NAG (C)
+0.1
-0.3
+0.2
-0.1
+0.1
carbon source
succinate (C); with MOPS
+0.1
+0.3
-0.3
-0.1
+0.0
carbon source
NAG (C); with MOPS
-0.1
-0.1
+0.5
-0.4
+0.1
carbon source
acetate (C)
+0.1
+0.1
-0.7
+0.4
+0.2
carbon source
acetate (C)
-0.1
+0.1
+0.3
-0.2
+0.1
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.5
-0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.1
+0.5
-0.0
-0.0
carbon source
succinate (C)
-0.1
+0.1
+0.5
-0.2
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.3
+0.1
+0.1
carbon source
D,L-Lactate (C)
-0.1
+0.3
+0.6
-0.2
+0.0
carbon source
NAG (C)
+0.0
+0.1
+0.4
+0.0
+0.1
carbon source
succinate (C)
+0.1
+0.3
+0.5
-0.0
+0.1
carbon source
acetate (C)
-0.0
-0.7
+1.3
+0.4
+0.1
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