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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11635 and PFLU_RS11640 are separated by 11 nucleotides
PFLU_RS11640 and PFLU_RS11645 are separated by 16 nucleotides
PFLU_RS11645 and PFLU_RS11650 are separated by 74 nucleotides
PFLU_RS11650 and PFLU_RS11655 are separated by 57 nucleotides
PFLU_RS11635: PFLU_RS11635 - hypothetical protein, at 2,581,375 to 2,582,364
_RS11635
PFLU_RS11640: PFLU_RS11640 - aldehyde dehydrogenase (NADP(+)), at 2,582,376 to 2,583,956
_RS11640
PFLU_RS11645: PFLU_RS11645 - SMP-30/gluconolactonase/LRE family protein, at 2,583,973 to 2,584,836
_RS11645
PFLU_RS11650: PFLU_RS11650 - arabinose ABC transporter substrate-binding protein, at 2,584,911 to 2,585,915
_RS11650
PFLU_RS11655: PFLU_RS11655 - L-arabinose ABC transporter ATP-binding protein AraG, at 2,585,973 to 2,587,499
_RS11655
Group
Condition
PFLU
_RS11635
PFLU
_RS11640
PFLU
_RS11645
PFLU
_RS11650
PFLU
_RS11655
carbon source
L-Arabinose (C)
-3.5
-3.9
-1.4
-1.9
-2.0
carbon source
L-Arabinose (C)
-4.3
-4.2
-1.4
-1.2
-1.4
carbon source
L-Arabinose (C); with MOPS
-5.2
-3.9
-1.5
-0.9
-1.0
carbon source
L-Arabinose (C); with MOPS
-4.3
-4.9
-1.5
-0.4
-1.0
carbon source
L-Arabinose (C)
-4.1
-3.8
-1.4
-1.5
-1.1
carbon source
L-Arabinose (C); with MOPS
-4.3
-3.5
-1.2
-0.6
-1.1
carbon source
acetate (C)
-0.0
-1.3
+0.4
-0.6
-0.1
carbon source
NAG (C); with MOPS
-0.1
+0.3
-0.4
-0.7
+0.2
carbon source
acetate (C)
-0.3
-0.8
+0.3
+0.4
+0.2
carbon source
D,L-Lactate (C)
+0.0
-0.1
+0.1
-0.2
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.1
+0.0
-0.1
carbon source
D-Glucose (C)
+0.0
-0.3
+0.1
-0.1
+0.1
carbon source
acetate (C)
+0.0
+0.3
+0.0
-0.2
-0.1
carbon source
NAG (C); with MOPS
+0.1
+0.4
-0.1
-0.4
-0.0
carbon source
NAG (C); with MOPS
+0.0
+0.2
-0.5
+0.2
+0.1
carbon source
NAG (C)
+0.1
-0.2
+0.1
+0.2
-0.1
carbon source
succinate (C)
-0.0
-0.1
+0.2
+0.3
-0.2
carbon source
D-Glucose (C); with MOPS
+0.2
+0.1
-0.4
+0.2
-0.0
carbon source
succinate (C)
+0.1
+0.0
-0.0
+0.4
-0.2
carbon source
succinate (C); with MOPS
-0.1
+0.6
-0.3
+0.1
+0.0
carbon source
D-Glucose (C)
-0.1
-0.1
+0.3
+0.3
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.2
-0.1
+0.2
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.4
+0.0
+0.2
-0.0
carbon source
acetate (C)
-0.3
+0.4
+0.0
+0.2
+0.2
carbon source
succinate (C); with MOPS
-0.1
+0.3
-0.1
+0.4
+0.0
carbon source
NAG (C)
-0.0
+0.2
+0.1
+0.3
-0.0
carbon source
D-Xylose (C)
+0.4
-0.3
+1.2
-0.2
-0.5
carbon source
succinate (C); with MOPS
+0.0
+0.1
+0.3
+0.4
+0.0
carbon source
D-Glucose (C)
+0.2
+0.4
+0.1
+0.3
+0.2
carbon source
D-Xylose (C)
+0.5
-0.0
+1.2
+0.0
-0.5
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