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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11620 and PFLU_RS11625 are separated by 48 nucleotides
PFLU_RS11625 and PFLU_RS11630 are separated by 193 nucleotides
PFLU_RS11630 and PFLU_RS11635 are separated by 15 nucleotides
PFLU_RS11635 and PFLU_RS11640 are separated by 11 nucleotides
PFLU_RS11620: PFLU_RS11620 - FadR family transcriptional regulator, at 2,577,336 to 2,578,058
_RS11620
PFLU_RS11625: PFLU_RS11625 - dihydroxy-acid dehydratase, at 2,578,107 to 2,579,843
_RS11625
PFLU_RS11630: PFLU_RS11630 - MFS transporter, at 2,580,037 to 2,581,359
_RS11630
PFLU_RS11635: PFLU_RS11635 - hypothetical protein, at 2,581,375 to 2,582,364
_RS11635
PFLU_RS11640: PFLU_RS11640 - aldehyde dehydrogenase (NADP(+)), at 2,582,376 to 2,583,956
_RS11640
Group
Condition
PFLU
_RS11620
PFLU
_RS11625
PFLU
_RS11630
PFLU
_RS11635
PFLU
_RS11640
carbon source
L-Arabinose (C); with MOPS
+3.7
-5.3
-3.2
-4.3
-4.9
carbon source
L-Arabinose (C); with MOPS
+3.3
-4.7
-3.4
-5.2
-3.9
carbon source
L-Arabinose (C); with MOPS
+3.4
-4.2
-3.2
-4.3
-3.5
carbon source
L-Arabinose (C)
+3.8
-3.6
-3.9
-4.1
-3.8
carbon source
L-Arabinose (C)
+4.6
-4.1
-3.5
-4.3
-4.2
carbon source
L-Arabinose (C)
+4.5
-3.9
-3.2
-3.5
-3.9
carbon source
acetate (C)
-0.3
-0.3
-0.2
-0.0
-1.3
carbon source
NAG (C); with MOPS
-1.7
-0.6
-0.0
+0.0
+0.2
carbon source
NAG (C); with MOPS
-1.8
-0.3
+0.1
-0.1
+0.3
carbon source
NAG (C); with MOPS
-1.9
+0.0
-0.1
+0.1
+0.4
carbon source
NAG (C)
-1.3
-0.0
-0.1
+0.1
-0.2
carbon source
NAG (C)
-1.5
-0.1
+0.0
-0.0
+0.2
carbon source
acetate (C)
-0.2
+0.3
-0.2
-0.3
-0.8
carbon source
D,L-Lactate (C)
-0.3
-0.2
-0.1
+0.0
-0.1
carbon source
D-Glucose (C)
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.3
+0.0
+0.1
+0.0
-0.3
carbon source
succinate (C); with MOPS
-0.4
-0.0
-0.0
-0.1
+0.3
carbon source
acetate (C)
-0.2
+0.0
-0.1
-0.3
+0.4
carbon source
succinate (C); with MOPS
-0.4
+0.0
+0.1
+0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
+0.0
+0.1
+0.2
carbon source
succinate (C)
-0.4
+0.1
-0.0
+0.1
+0.3
carbon source
acetate (C)
-0.1
-0.0
-0.1
+0.0
+0.3
carbon source
Trisodium citrate (C)
+0.1
+0.1
+0.2
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.1
+0.0
-0.0
+0.4
carbon source
D-Glucose (C); with MOPS
+0.1
+0.0
+0.1
+0.2
+0.2
carbon source
D-Glucose (C); with MOPS
+0.1
+0.1
+0.1
+0.2
+0.1
carbon source
succinate (C); with MOPS
+0.0
+0.2
-0.0
-0.1
+0.6
carbon source
D-Glucose (C)
-0.0
+0.2
+0.2
+0.2
+0.4
carbon source
D-Xylose (C)
+3.0
+1.5
+0.2
+0.4
-0.3
carbon source
D-Xylose (C)
+2.8
+1.4
+0.2
+0.5
-0.0
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