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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11235 and PFLU_RS11240 are separated by 106 nucleotides
PFLU_RS11240 and PFLU_RS11245 overlap by 4 nucleotides
PFLU_RS11245 and PFLU_RS11250 are separated by 54 nucleotides
PFLU_RS11250 and PFLU_RS11255 are separated by 959 nucleotides
PFLU_RS11235: PFLU_RS11235 - LysR family transcriptional regulator, at 2,483,889 to 2,484,791
_RS11235
PFLU_RS11240: PFLU_RS11240 - MFS transporter, at 2,484,898 to 2,486,265
_RS11240
PFLU_RS11245: PFLU_RS11245 - glucarate dehydratase, at 2,486,262 to 2,487,536
_RS11245
PFLU_RS11250: PFLU_RS11250 - AMP-binding protein, at 2,487,591 to 2,489,273
_RS11250
PFLU_RS11255: PFLU_RS11255 - LysR family transcriptional regulator, at 2,490,233 to 2,491,174
_RS11255
Group
Condition
PFLU
_RS11235
PFLU
_RS11240
PFLU
_RS11245
PFLU
_RS11250
PFLU
_RS11255
carbon source
acetate (C)
-0.4
-0.2
+0.1
-0.6
+0.3
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.1
-0.5
-0.2
-0.0
carbon source
L-Arabinose (C)
-0.2
+0.4
-0.6
+0.1
-0.2
carbon source
NAG (C); with MOPS
-0.2
+0.0
-0.1
+0.1
-0.4
carbon source
acetate (C)
-0.1
-0.1
+0.1
-0.3
-0.2
carbon source
succinate (C)
-0.1
-0.1
-0.0
+0.1
-0.3
carbon source
D-Glucose (C)
-0.1
-0.1
-0.3
+0.1
+0.1
carbon source
NAG (C)
-0.2
-0.1
-0.1
-0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
-0.3
+0.1
+0.0
carbon source
Trisodium citrate (C)
-0.2
+0.0
+0.1
-0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.2
-0.0
-0.1
carbon source
succinate (C); with MOPS
-0.0
+0.1
-0.2
-0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.1
-0.3
+0.1
+0.1
carbon source
acetate (C)
-0.5
+0.0
+0.1
+0.0
+0.2
carbon source
D-Xylose (C)
-0.0
-0.2
+0.2
+0.1
-0.3
carbon source
D-Glucose (C); with MOPS
+0.0
+0.1
+0.1
+0.1
-0.3
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
+0.1
-0.2
+0.0
carbon source
Trisodium citrate (C)
-0.1
+0.0
-0.1
+0.0
+0.2
carbon source
D-Glucose (C)
-0.2
+0.1
-0.1
+0.0
+0.3
carbon source
NAG (C); with MOPS
+0.0
-0.0
-0.3
+0.4
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.1
-0.1
+0.1
+0.0
carbon source
acetate (C)
+0.2
-0.2
+0.0
+0.0
+0.1
carbon source
NAG (C); with MOPS
+0.2
+0.0
-0.3
+0.1
+0.2
carbon source
succinate (C)
+0.0
+0.3
-0.0
+0.0
-0.0
carbon source
acetate (C)
+0.1
+0.0
-0.1
-0.0
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.1
+0.1
-0.0
+0.3
carbon source
D,L-Lactate (C)
-0.0
+0.1
+0.1
+0.0
+0.1
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.3
-0.0
+0.0
carbon source
NAG (C)
+0.1
-0.0
-0.0
+0.2
+0.2
carbon source
L-Arabinose (C)
+0.0
+0.2
+0.3
+0.3
+0.6
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