Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11150 and PFLU_RS11155 are separated by 260 nucleotides
PFLU_RS11155 and PFLU_RS11160 are separated by 16 nucleotides
PFLU_RS11160 and PFLU_RS11165 overlap by 1 nucleotides
PFLU_RS11165 and PFLU_RS11170 are separated by 584 nucleotides
PFLU_RS11150: PFLU_RS11150 - pectin lyase, at 2,463,372 to 2,464,625
_RS11150
PFLU_RS11155: PFLU_RS11155 - cytochrome c, at 2,464,886 to 2,466,226
_RS11155
PFLU_RS11160: PFLU_RS11160 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 2,466,243 to 2,468,474
_RS11160
PFLU_RS11165: PFLU_RS11165 - (2Fe-2S)-binding protein, at 2,468,474 to 2,468,929
_RS11165
PFLU_RS11170: PFLU_RS11170 - FadR family transcriptional regulator, at 2,469,514 to 2,470,299
_RS11170
Group
Condition
PFLU
_RS11150
PFLU
_RS11155
PFLU
_RS11160
PFLU
_RS11165
PFLU
_RS11170
carbon source
acetate (C)
-0.2
-0.1
-0.4
-0.3
-0.5
carbon source
acetate (C)
-0.7
+0.1
-0.3
-0.3
+0.0
carbon source
succinate (C)
-0.4
-0.2
-0.2
-0.0
+0.1
carbon source
D-Glucose (C)
-0.2
-0.2
-0.1
+0.1
-0.3
carbon source
succinate (C); with MOPS
-0.4
-0.1
-0.1
+0.0
-0.2
carbon source
succinate (C)
-0.2
-0.1
-0.2
-0.1
+0.0
carbon source
D,L-Lactate (C)
-0.3
-0.1
-0.1
-0.2
+0.1
carbon source
D-Xylose (C)
-0.3
-0.1
+0.1
+0.1
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.3
+0.1
-0.1
-0.1
-0.0
carbon source
succinate (C); with MOPS
-0.3
-0.2
-0.0
+0.1
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.1
-0.1
+0.0
-0.2
carbon source
Trisodium citrate (C)
-0.1
+0.0
-0.1
-0.1
-0.1
carbon source
NAG (C)
-0.1
-0.2
-0.0
-0.1
-0.0
carbon source
L-Arabinose (C)
-0.4
+0.0
-0.2
+0.1
+0.2
carbon source
D-Glucose (C)
-0.0
+0.1
+0.0
-0.3
-0.2
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.1
-0.0
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.0
-0.0
-0.2
+0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
acetate (C)
-0.3
-0.1
-0.1
+0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.3
-0.0
+0.1
+0.1
carbon source
acetate (C)
-0.1
-0.1
+0.2
+0.2
-0.2
carbon source
D-Glucose (C)
-0.0
-0.0
-0.1
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.2
+0.1
+0.1
carbon source
NAG (C); with MOPS
-0.3
+0.3
-0.0
+0.1
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.1
+0.1
+0.3
carbon source
succinate (C)
+0.0
+0.2
-0.0
-0.1
+0.3
carbon source
acetate (C)
+0.1
+0.1
-0.0
+0.1
+0.2
carbon source
L-Arabinose (C)
-0.4
+0.4
+0.1
+0.2
+0.1
carbon source
NAG (C); with MOPS
+0.2
+0.2
-0.1
-0.1
+0.3
carbon source
L-Arabinose (C)
+0.1
+0.6
+0.0
+0.3
-0.2
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