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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS11060 and PFLU_RS11065 are separated by 4 nucleotides
PFLU_RS11065 and PFLU_RS11070 are separated by 404 nucleotides
PFLU_RS11070 and PFLU_RS11075 are separated by 102 nucleotides
PFLU_RS11075 and PFLU_RS11080 are separated by 16 nucleotides
PFLU_RS11060: PFLU_RS11060 - DUF3592 domain-containing protein, at 2,442,451 to 2,442,894
_RS11060
PFLU_RS11065: PFLU_RS11065 - hypothetical protein, at 2,442,899 to 2,443,486
_RS11065
PFLU_RS11070: PFLU_RS11070 - TetR/AcrR family transcriptional regulator, at 2,443,891 to 2,444,481
_RS11070
PFLU_RS11075: PFLU_RS11075 - damage-inducible protein DinB, at 2,444,584 to 2,445,150
_RS11075
PFLU_RS11080: PFLU_RS11080 - Crp/Fnr family transcriptional regulator, at 2,445,167 to 2,445,838
_RS11080
Group
Condition
PFLU
_RS11060
PFLU
_RS11065
PFLU
_RS11070
PFLU
_RS11075
PFLU
_RS11080
carbon source
D,L-Lactate (C)
-0.9
-0.0
+0.1
-0.1
-0.1
carbon source
acetate (C)
-0.3
+0.1
+0.3
-0.3
-0.6
carbon source
acetate (C)
-1.0
-0.1
+0.4
-0.1
-0.0
carbon source
succinate (C)
-0.3
-0.0
-0.2
+0.0
-0.2
carbon source
NAG (C)
-0.5
-0.0
+0.1
-0.1
-0.1
carbon source
Trisodium citrate (C)
-0.2
+0.2
-0.2
-0.1
-0.2
carbon source
NAG (C)
-0.7
+0.1
+0.2
+0.1
-0.0
carbon source
L-Arabinose (C)
-0.3
+0.3
-0.2
+0.1
-0.3
carbon source
D-Glucose (C)
-0.3
+0.1
+0.0
-0.1
-0.1
carbon source
D-Xylose (C)
-0.3
+0.1
-0.0
-0.1
+0.0
carbon source
acetate (C)
-0.1
-0.2
+0.2
-0.0
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.3
+0.1
-0.1
+0.1
-0.0
carbon source
NAG (C); with MOPS
-0.4
-0.2
+0.1
+0.2
+0.1
carbon source
succinate (C); with MOPS
-0.4
+0.2
-0.1
+0.2
+0.1
carbon source
D,L-Lactate (C)
-0.3
+0.1
+0.2
+0.0
-0.1
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.3
+0.1
-0.2
carbon source
L-Arabinose (C)
-0.3
+0.2
+0.1
+0.2
-0.2
carbon source
NAG (C); with MOPS
-0.1
-0.1
+0.3
-0.0
-0.1
carbon source
succinate (C); with MOPS
-0.3
+0.0
+0.1
+0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.1
+0.2
+0.0
-0.0
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
+0.1
+0.2
-0.0
carbon source
NAG (C); with MOPS
-0.1
-0.1
-0.1
+0.1
+0.2
carbon source
D-Glucose (C); with MOPS
+0.2
+0.2
-0.1
+0.1
-0.2
carbon source
acetate (C)
-0.3
+0.0
+0.3
+0.1
+0.1
carbon source
succinate (C)
-0.6
+0.1
+0.3
+0.3
+0.1
carbon source
D-Glucose (C)
-0.1
+0.1
+0.2
+0.1
+0.1
carbon source
D-Glucose (C)
+0.0
-0.1
+0.2
+0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.0
+0.2
+0.0
+0.1
carbon source
D-Glucose (C); with MOPS
+0.3
+0.2
+0.3
+0.0
-0.0
carbon source
acetate (C)
+0.7
+0.1
+0.5
+0.1
+0.0
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