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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS10995 and PFLU_RS11000 are separated by 17 nucleotides
PFLU_RS11000 and PFLU_RS11005 overlap by 4 nucleotides
PFLU_RS11005 and PFLU_RS11010 are separated by 21 nucleotides
PFLU_RS11010 and PFLU_RS11015 are separated by 27 nucleotides
PFLU_RS10995: PFLU_RS10995 - amino acid ABC transporter ATP-binding protein, at 2,425,511 to 2,426,347
_RS10995
PFLU_RS11000: PFLU_RS11000 - cysteine dioxygenase, at 2,426,365 to 2,426,961
_RS11000
PFLU_RS11005: PFLU_RS11005 - glutathione S-transferase, at 2,426,958 to 2,427,614
_RS11005
PFLU_RS11010: PFLU_RS11010 - cystathionine beta-lyase, at 2,427,636 to 2,430,392
_RS11010
PFLU_RS11015: PFLU_RS11015 - UTRA domain-containing protein, at 2,430,420 to 2,431,115
_RS11015
Group
Condition
PFLU
_RS10995
PFLU
_RS11000
PFLU
_RS11005
PFLU
_RS11010
PFLU
_RS11015
carbon source
succinate (C)
-0.1
-0.4
+0.1
-0.2
-0.3
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.3
-0.5
-0.2
+0.5
carbon source
D-Glucose (C); with MOPS
-0.1
-0.3
-0.1
-0.2
-0.1
carbon source
acetate (C)
+0.3
-1.3
+0.2
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.4
-0.1
-0.3
-0.0
-0.6
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.7
-0.7
-0.1
+0.5
carbon source
acetate (C)
-0.7
-0.1
-0.1
+0.1
+0.2
carbon source
acetate (C)
+0.1
+0.2
-0.4
+0.2
-0.6
carbon source
D,L-Lactate (C)
-0.2
-0.2
+0.2
-0.1
-0.2
carbon source
D-Xylose (C)
-0.0
-0.6
+0.0
-0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.3
-0.4
-0.3
-0.1
carbon source
D-Glucose (C)
+0.2
+0.3
-0.4
-0.1
-0.3
carbon source
D-Glucose (C)
+0.2
-0.7
-0.2
-0.1
+0.5
carbon source
succinate (C)
-0.2
+0.2
-0.3
-0.1
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.5
+0.0
-0.1
-0.6
carbon source
D,L-Lactate (C)
+0.2
-0.3
-0.2
+0.0
-0.1
carbon source
succinate (C); with MOPS
+0.1
+0.2
-0.0
-0.0
-0.4
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.1
-0.1
-0.1
-0.1
carbon source
acetate (C)
-0.3
+0.0
+0.1
-0.0
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.5
+0.1
+0.0
+0.3
carbon source
succinate (C); with MOPS
+0.1
+0.3
-0.1
-0.0
-0.2
carbon source
NAG (C); with MOPS
-0.2
+0.3
+0.0
-0.0
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.5
-0.1
-0.0
-0.5
carbon source
L-Arabinose (C)
+0.2
-0.0
-0.1
-0.1
+0.2
carbon source
NAG (C); with MOPS
-0.0
+0.3
-0.5
+0.1
+0.5
carbon source
D-Glucose (C); with MOPS
+0.4
+0.2
-0.0
-0.1
+0.0
carbon source
NAG (C)
+0.2
-0.1
+0.0
+0.1
+0.2
carbon source
succinate (C)
-0.0
+0.4
+0.1
-0.0
+0.2
carbon source
L-Arabinose (C)
+0.7
+0.1
-0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.3
+0.6
-0.2
-0.0
+0.4
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