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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS31505 and PFLU_RS30600 are separated by 14 nucleotides
PFLU_RS30600 and PFLU_RS09885 are separated by 525 nucleotides
PFLU_RS09885 and PFLU_RS30605 are separated by 31 nucleotides
PFLU_RS30605 and PFLU_RS09890 are separated by 171 nucleotides
PFLU_RS31505: PFLU_RS31505 - transposase, at 2,176,174 to 2,176,385
_RS31505
PFLU_RS30600: PFLU_RS30600 - hypothetical protein, at 2,176,400 to 2,177,059
_RS30600
PFLU_RS09885: PFLU_RS09885 - threonine synthase, at 2,177,585 to 2,178,961
_RS09885
PFLU_RS30605: PFLU_RS30605 - Lrp/AsnC family transcriptional regulator, at 2,178,993 to 2,179,430
_RS30605
PFLU_RS09890: PFLU_RS09890 - homoserine dehydrogenase, at 2,179,602 to 2,180,642
_RS09890
Group
Condition
PFLU
_RS31505
PFLU
_RS30600
PFLU
_RS09885
PFLU
_RS30605
PFLU
_RS09890
carbon source
acetate (C)
+0.3
-0.1
-1.0
-0.1
+0.1
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
-0.5
-0.2
+0.1
carbon source
acetate (C)
+0.4
+0.2
-1.4
+0.0
+0.1
carbon source
NAG (C)
-0.0
+0.0
-0.6
+0.1
-0.1
carbon source
D,L-Lactate (C)
+0.2
-0.0
-0.4
+0.0
-0.3
carbon source
NAG (C)
+0.2
-0.1
-0.7
+0.1
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.6
-0.1
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.2
-0.3
+0.2
-0.3
carbon source
NAG (C); with MOPS
+0.1
+0.0
-0.6
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
+0.0
+0.1
-0.4
+0.3
-0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.6
+0.2
+0.1
carbon source
D-Glucose (C)
+0.1
+0.0
-0.5
+0.4
-0.1
carbon source
succinate (C)
+0.1
+0.1
-0.5
+0.0
+0.2
carbon source
succinate (C)
+0.1
-0.0
-0.4
+0.4
-0.1
carbon source
NAG (C); with MOPS
+0.0
+0.3
-0.8
+0.1
+0.3
carbon source
succinate (C); with MOPS
+0.1
+0.1
-0.4
+0.4
-0.1
carbon source
NAG (C); with MOPS
+0.3
+0.3
-0.9
+0.3
+0.1
carbon source
succinate (C); with MOPS
+0.2
+0.1
-0.4
-0.0
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.0
-0.3
+0.2
+0.3
carbon source
L-Arabinose (C)
-0.0
-0.2
-0.2
+0.1
+0.5
carbon source
D-Glucose (C); with MOPS
+0.0
+0.1
-0.5
+0.4
+0.2
carbon source
succinate (C); with MOPS
-0.0
+0.0
-0.5
+0.5
+0.3
carbon source
D-Glucose (C)
+0.2
-0.1
-0.3
+0.3
+0.2
carbon source
Trisodium citrate (C)
+0.2
+0.1
-0.5
+0.6
+0.1
carbon source
D-Glucose (C)
+0.1
-0.0
-0.2
+0.6
+0.1
carbon source
succinate (C)
+0.4
+0.2
-0.4
+0.3
+0.1
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.0
+0.5
+0.2
carbon source
L-Arabinose (C)
+0.3
+0.3
-0.5
+0.5
+0.2
carbon source
acetate (C)
+0.3
+0.4
-0.9
+0.6
+0.5
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.1
-0.2
+0.5
+0.5
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