Fitness for 5 genes in Pseudomonas fluorescens SBW25

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPFLU_RS09680 and PFLU_RS09685 are separated by 9 nucleotidesPFLU_RS09685 and PFLU_RS09690 overlap by 4 nucleotidesPFLU_RS09690 and PFLU_RS09695 are separated by 106 nucleotidesPFLU_RS09695 and PFLU_RS09700 are separated by 52 nucleotides PFLU_RS09680: PFLU_RS09680 - TIGR03759 family integrating conjugative element protein, at 2,138,111 to 2,138,830 _RS09680 PFLU_RS09685: PFLU_RS09685 - hypothetical protein, at 2,138,840 to 2,139,511 _RS09685 PFLU_RS09690: PFLU_RS09690 - pili assembly chaperone, at 2,139,508 to 2,140,050 _RS09690 PFLU_RS09695: PFLU_RS09695 - ABC transporter substrate-binding protein, at 2,140,157 to 2,140,903 _RS09695 PFLU_RS09700: PFLU_RS09700 - DNA repair protein RadC, at 2,140,956 to 2,141,450 _RS09700
Group Condition PFLU_RS09680 PFLU_RS09685 PFLU_RS09690 PFLU_RS09695 PFLU_RS09700
carbon source acetate (C) -1.2 -0.0 -0.5 +0.4 -0.6
carbon source succinate (C) -0.2 -0.5 -0.2 -0.2 -0.2
carbon source D-Glucose (C); with MOPS -0.0 -0.4 -0.3 -0.3 -0.2
carbon source acetate (C) -0.4 -1.4 +0.4 +0.2 +0.0
carbon source acetate (C) -0.3 -0.5 -0.1 -0.5 +0.3
carbon source L-Arabinose (C) -0.1 -0.5 -0.1 -0.5 +0.2
carbon source L-Arabinose (C); with MOPS -0.0 -0.2 +0.0 -0.7 -0.0
carbon source L-Arabinose (C); with MOPS -0.2 -0.0 -0.4 +0.0 -0.2
carbon source NAG (C); with MOPS -0.2 -0.4 +0.4 -0.1 -0.4
carbon source D-Glucose (C); with MOPS -0.2 +0.1 -0.2 -0.2 -0.1
carbon source Trisodium citrate (C) -0.3 +0.3 -0.2 -0.1 -0.3
carbon source D,L-Lactate (C) -0.0 -0.4 -0.2 -0.0 +0.1
carbon source succinate (C); with MOPS -0.2 -0.1 +0.1 +0.0 -0.5
carbon source L-Arabinose (C) -0.5 +0.3 +0.1 -0.2 -0.2
carbon source L-Arabinose (C) -0.2 -0.0 +0.2 -0.2 -0.3
carbon source Trisodium citrate (C); with MOPS +0.3 -0.5 -0.2 -0.0 -0.2
carbon source succinate (C); with MOPS -0.4 -0.0 -0.2 -0.1 +0.2
carbon source succinate (C) +0.0 -0.3 +0.3 +0.1 -0.5
carbon source D-Glucose (C); with MOPS +0.2 -0.1 -0.1 -0.5 +0.2
carbon source D-Glucose (C) +0.1 +0.2 +0.3 -0.5 -0.3
carbon source succinate (C); with MOPS -0.1 +0.1 +0.2 -0.2 -0.2
carbon source Trisodium citrate (C); with MOPS -0.1 +0.2 +0.2 -0.3 -0.2
carbon source L-Arabinose (C); with MOPS +0.1 +0.4 -0.1 -0.1 -0.4
carbon source Trisodium citrate (C) +0.1 +0.2 +0.0 -0.3 -0.1
carbon source NAG (C); with MOPS -0.3 +0.3 +0.2 -0.2 -0.1
carbon source D-Glucose (C) -0.1 +0.2 +0.4 -0.2 -0.3
carbon source NAG (C) +0.4 +0.1 -0.1 -0.1 -0.1
carbon source NAG (C); with MOPS +0.1 +0.2 +0.2 -0.3 +0.0
carbon source Trisodium citrate (C) +0.1 +0.3 -0.1 -0.1 +0.1
carbon source D-Xylose (C) +0.2 +0.5 +0.0 +0.3 -0.1
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