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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS08500 and PFLU_RS31470 are separated by 878 nucleotides
PFLU_RS31470 and PFLU_RS08505 are separated by 104 nucleotides
PFLU_RS08505 and PFLU_RS08510 are separated by 304 nucleotides
PFLU_RS08510 and PFLU_RS08515 are separated by 202 nucleotides
PFLU_RS08500: PFLU_RS08500 - thiopurine S-methyltransferase, at 1,894,335 to 1,894,991
_RS08500
PFLU_RS31470: PFLU_RS31470 - hypothetical protein, at 1,895,870 to 1,896,191
_RS31470
PFLU_RS08505: PFLU_RS08505 - protease HtpX, at 1,896,296 to 1,897,183
_RS08505
PFLU_RS08510: PFLU_RS08510 - pyridoxal phosphate-dependent aminotransferase, at 1,897,488 to 1,898,699
_RS08510
PFLU_RS08515: PFLU_RS08515 - peptide-methionine (R)-S-oxide reductase MsrB, at 1,898,902 to 1,899,294
_RS08515
Group
Condition
PFLU
_RS08500
PFLU
_RS31470
PFLU
_RS08505
PFLU
_RS08510
PFLU
_RS08515
carbon source
D-Glucose (C)
-0.2
-0.4
-3.5
-0.2
-0.1
carbon source
NAG (C); with MOPS
-0.2
-0.1
-3.5
-0.2
+0.2
carbon source
NAG (C); with MOPS
+0.1
-0.0
-3.7
-0.2
+0.2
carbon source
acetate (C)
-0.1
-0.2
-3.4
-0.0
+0.3
carbon source
acetate (C)
-0.1
-0.6
-2.3
-0.1
-0.0
carbon source
NAG (C)
+0.1
+0.2
-3.3
+0.0
-0.1
carbon source
Trisodium citrate (C)
-0.3
-0.0
-2.5
-0.0
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.0
-2.8
-0.3
+0.4
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.1
-2.4
-0.1
-0.3
carbon source
NAG (C); with MOPS
+0.0
+0.3
-2.9
-0.3
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.0
-2.8
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.3
-2.4
-0.1
-0.3
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
-2.3
-0.3
+0.0
carbon source
D-Glucose (C)
-0.2
-0.0
-2.2
-0.1
-0.0
carbon source
acetate (C)
+0.1
-0.3
-2.4
-0.1
+0.3
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.0
-2.0
+0.0
-0.2
carbon source
Trisodium citrate (C)
+0.0
+0.1
-2.4
-0.0
+0.0
carbon source
D-Glucose (C)
-0.2
+0.7
-2.6
+0.1
-0.1
carbon source
NAG (C)
+0.1
+0.0
-2.4
-0.0
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.4
-1.6
-0.5
-0.1
carbon source
acetate (C)
+0.0
+0.6
-2.7
-0.1
+0.2
carbon source
D-Glucose (C); with MOPS
+0.1
-0.3
-1.3
-0.1
+0.0
carbon source
D-Glucose (C); with MOPS
-0.2
-0.1
-1.3
-0.2
+0.3
carbon source
acetate (C)
+0.2
-0.2
-1.0
-0.3
-0.0
carbon source
L-Arabinose (C)
+0.0
+0.1
-1.7
+0.2
-0.0
carbon source
succinate (C); with MOPS
-0.2
+0.5
-1.1
-0.2
-0.1
carbon source
succinate (C)
-0.1
+0.2
-1.4
-0.2
+0.3
carbon source
succinate (C)
-0.0
+0.4
-1.2
-0.4
+0.2
carbon source
succinate (C); with MOPS
+0.0
+0.4
-1.2
-0.2
+0.0
carbon source
succinate (C); with MOPS
-0.1
+0.5
-0.9
-0.2
+0.2
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