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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS08370 and PFLU_RS08375 are separated by 613 nucleotides
PFLU_RS08375 and PFLU_RS08380 are separated by 64 nucleotides
PFLU_RS08380 and PFLU_RS08385 are separated by 131 nucleotides
PFLU_RS08385 and PFLU_RS08390 overlap by 2 nucleotides
PFLU_RS08370: PFLU_RS08370 - hypothetical protein, at 1,871,897 to 1,872,148
_RS08370
PFLU_RS08375: PFLU_RS08375 - N-acetyltransferase, at 1,872,762 to 1,873,043
_RS08375
PFLU_RS08380: PFLU_RS08380 - 3-deoxy-7-phosphoheptulonate synthase, at 1,873,108 to 1,874,184
_RS08380
PFLU_RS08385: PFLU_RS08385 - PilZ domain-containing protein, at 1,874,316 to 1,874,750
_RS08385
PFLU_RS08390: PFLU_RS08390 - hypothetical protein, at 1,874,749 to 1,875,135
_RS08390
Group
Condition
PFLU
_RS08370
PFLU
_RS08375
PFLU
_RS08380
PFLU
_RS08385
PFLU
_RS08390
carbon source
acetate (C)
-2.4
-0.9
-1.4
-0.7
-0.6
carbon source
NAG (C); with MOPS
-1.5
-1.1
-1.5
-1.0
-0.5
carbon source
NAG (C); with MOPS
-1.0
-1.2
-1.5
-0.7
-0.7
carbon source
NAG (C); with MOPS
-1.0
-1.0
-1.8
-0.6
-0.6
carbon source
NAG (C)
-0.6
-1.0
-2.2
-0.4
-0.3
carbon source
L-Arabinose (C); with MOPS
-1.6
-1.0
-0.1
-0.4
-0.4
carbon source
acetate (C)
-1.1
-0.9
-1.1
-0.0
-0.3
carbon source
L-Arabinose (C)
-1.8
-0.3
-0.3
-0.3
-0.5
carbon source
L-Arabinose (C); with MOPS
-1.2
-1.1
-0.2
-0.3
-0.3
carbon source
NAG (C)
-0.2
-1.1
-1.4
-0.2
-0.2
carbon source
L-Arabinose (C)
-0.7
-0.5
-0.2
-0.9
-0.1
carbon source
L-Arabinose (C); with MOPS
-1.1
-1.1
-0.4
+0.6
-0.3
carbon source
L-Arabinose (C)
-1.1
-0.5
-0.4
-0.1
-0.2
carbon source
Trisodium citrate (C)
-0.7
-0.2
-0.6
-0.4
+0.0
carbon source
acetate (C)
-1.0
-0.3
-0.5
+0.3
-0.3
carbon source
D-Glucose (C)
-0.7
-0.3
-0.2
-0.6
-0.1
carbon source
Trisodium citrate (C); with MOPS
-1.2
-0.3
-0.2
+0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.4
-0.1
-0.5
-0.3
-0.3
carbon source
D-Glucose (C); with MOPS
-0.5
-0.4
-0.1
-0.5
-0.1
carbon source
Trisodium citrate (C)
-1.0
-0.3
-0.4
+0.3
+0.0
carbon source
Trisodium citrate (C)
-0.8
-0.3
-0.3
+0.0
-0.1
carbon source
D-Glucose (C); with MOPS
-0.6
-0.3
-0.7
+0.3
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.8
-0.2
-0.4
+0.1
+0.0
carbon source
D-Glucose (C)
-0.4
-0.4
-0.4
+0.5
-0.2
carbon source
D-Xylose (C)
-0.3
+0.4
-0.6
-0.3
-0.1
carbon source
D-Glucose (C); with MOPS
-0.8
-0.4
-0.1
+0.4
+0.2
carbon source
D,L-Lactate (C)
+0.2
+0.1
-0.3
-0.6
-0.0
carbon source
acetate (C)
+0.3
-0.2
-0.5
-0.0
-0.2
carbon source
D-Xylose (C)
+0.2
+0.5
-0.5
-0.2
-0.1
carbon source
acetate (C)
+1.1
-0.0
-0.7
+0.4
+0.0
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