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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS08155 and PFLU_RS30510 are separated by 5 nucleotides
PFLU_RS30510 and PFLU_RS08160 are separated by 185 nucleotides
PFLU_RS08160 and PFLU_RS08165 overlap by 1 nucleotides
PFLU_RS08165 and PFLU_RS30515 are separated by 157 nucleotides
PFLU_RS08155: PFLU_RS08155 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 1,821,538 to 1,822,668
_RS08155
PFLU_RS30510: PFLU_RS30510 - glycosyltransferase family 4 protein, at 1,822,674 to 1,823,891
_RS30510
PFLU_RS08160: PFLU_RS08160 - sugar transferase, at 1,824,077 to 1,824,721
_RS08160
PFLU_RS08165: PFLU_RS08165 - acyl carrier protein, at 1,824,721 to 1,824,927
_RS08165
PFLU_RS30515: PFLU_RS30515 - Rieske 2Fe-2S domain-containing protein, at 1,825,085 to 1,826,116
_RS30515
Group
Condition
PFLU
_RS08155
PFLU
_RS30510
PFLU
_RS08160
PFLU
_RS08165
PFLU
_RS30515
carbon source
L-Arabinose (C); with MOPS
-2.5
-1.2
-3.2
-3.2
-0.2
carbon source
L-Arabinose (C)
-2.7
-1.9
-2.5
-2.8
-0.1
carbon source
L-Arabinose (C)
-2.4
-1.4
-3.0
-2.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-1.8
-1.6
-2.7
-2.2
-0.4
carbon source
L-Arabinose (C); with MOPS
-1.8
-0.9
-3.1
-2.2
-0.4
carbon source
L-Arabinose (C)
-3.3
-1.4
-3.0
-0.5
+0.1
carbon source
NAG (C); with MOPS
-3.5
-1.6
-2.0
-1.4
+0.6
carbon source
D-Glucose (C)
-1.7
-0.9
-2.8
-3.0
+0.6
carbon source
D-Glucose (C)
-1.4
-0.6
-2.8
-2.9
+0.3
carbon source
NAG (C); with MOPS
-3.6
-2.1
-1.4
-1.3
+1.3
carbon source
D-Glucose (C)
-1.6
-0.8
-2.4
-2.4
+0.5
carbon source
acetate (C)
-2.6
-1.5
-1.7
-1.9
+1.4
carbon source
Trisodium citrate (C); with MOPS
-0.4
-0.3
-2.5
-2.5
-0.3
carbon source
acetate (C)
-2.7
-2.1
-1.6
-1.4
+1.8
carbon source
Trisodium citrate (C)
-1.5
-1.2
-2.2
-1.8
+1.0
carbon source
NAG (C); with MOPS
-3.4
-1.2
-1.4
-0.6
+1.0
carbon source
Trisodium citrate (C)
-1.6
-0.7
-2.0
-2.3
+1.1
carbon source
Trisodium citrate (C)
-1.6
-0.6
-2.1
-2.2
+1.0
carbon source
acetate (C)
-3.3
-1.0
-1.9
-1.4
+2.2
carbon source
D-Glucose (C); with MOPS
-0.7
-0.9
-2.8
-1.1
+0.4
carbon source
succinate (C); with MOPS
-0.4
+0.0
-3.0
-1.9
+0.4
carbon source
NAG (C)
-4.4
+0.3
-1.0
+0.4
+0.3
carbon source
succinate (C); with MOPS
+0.2
-0.8
-2.5
-1.9
+0.6
carbon source
D-Glucose (C); with MOPS
-1.3
+0.0
-2.3
-1.3
+0.8
carbon source
succinate (C); with MOPS
-0.6
-0.3
-2.6
-1.6
+1.2
carbon source
NAG (C)
-4.0
+0.5
-0.6
+0.5
+0.4
carbon source
D-Glucose (C); with MOPS
-0.5
-0.7
-1.3
-1.7
+1.1
carbon source
succinate (C)
-1.2
-0.5
-1.1
-1.3
+1.2
carbon source
succinate (C)
+0.1
-0.3
-2.1
-1.6
+1.4
carbon source
Trisodium citrate (C); with MOPS
-0.5
-1.2
-1.2
-0.0
+0.7
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