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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07990 and PFLU_RS07995 are separated by 102 nucleotides
PFLU_RS07995 and PFLU_RS08000 are separated by 121 nucleotides
PFLU_RS08000 and PFLU_RS08005 are separated by 122 nucleotides
PFLU_RS08005 and PFLU_RS08010 are separated by 128 nucleotides
PFLU_RS07990: PFLU_RS07990 - LysR family transcriptional regulator, at 1,780,954 to 1,781,859
_RS07990
PFLU_RS07995: PFLU_RS07995 - aspartate aminotransferase family protein, at 1,781,962 to 1,783,131
_RS07995
PFLU_RS08000: PFLU_RS08000 - LysR family transcriptional regulator, at 1,783,253 to 1,784,167
_RS08000
PFLU_RS08005: PFLU_RS08005 - Bcr/CflA family multidrug efflux MFS transporter, at 1,784,290 to 1,785,474
_RS08005
PFLU_RS08010: PFLU_RS08010 - hypothetical protein, at 1,785,603 to 1,786,436
_RS08010
Group
Condition
PFLU
_RS07990
PFLU
_RS07995
PFLU
_RS08000
PFLU
_RS08005
PFLU
_RS08010
carbon source
D-Xylose (C)
-0.2
-0.4
-0.2
+0.0
+0.0
carbon source
D,L-Lactate (C)
-0.1
-0.1
+0.0
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.0
-0.1
-0.2
+0.1
-0.1
carbon source
D-Glucose (C); with MOPS
+0.0
-0.5
+0.0
+0.2
+0.1
carbon source
D-Xylose (C)
-0.1
-0.1
+0.0
-0.0
+0.0
carbon source
NAG (C); with MOPS
+0.1
+0.1
-0.1
-0.1
-0.1
carbon source
NAG (C)
-0.2
-0.0
+0.1
-0.1
+0.2
carbon source
acetate (C)
-0.1
+0.1
+0.0
-0.1
+0.1
carbon source
D-Glucose (C)
-0.1
+0.1
-0.2
+0.1
+0.1
carbon source
acetate (C)
+0.0
+0.3
-0.5
+0.2
+0.0
carbon source
L-Arabinose (C)
+0.1
-0.3
+0.2
+0.2
-0.1
carbon source
NAG (C)
-0.1
+0.0
+0.1
+0.1
+0.1
carbon source
acetate (C)
-0.1
+0.2
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
-0.1
+0.3
-0.2
+0.1
+0.1
carbon source
D-Glucose (C)
-0.1
+0.2
-0.1
+0.2
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.2
+0.1
+0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.0
-0.0
+0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.4
-0.0
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.0
+0.0
+0.2
+0.1
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.1
+0.2
+0.1
carbon source
succinate (C)
-0.1
+0.3
+0.3
-0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.3
+0.1
+0.0
+0.0
carbon source
D-Glucose (C); with MOPS
+0.0
+0.2
+0.2
+0.1
-0.0
carbon source
succinate (C)
+0.0
+0.2
+0.2
+0.2
-0.0
carbon source
NAG (C); with MOPS
+0.2
+0.1
-0.2
+0.1
+0.2
carbon source
succinate (C); with MOPS
+0.2
+0.3
+0.0
+0.1
+0.0
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.2
+0.2
+0.2
carbon source
acetate (C)
+0.1
+0.6
-0.3
+0.3
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.7
+0.0
+0.2
-0.1
carbon source
L-Arabinose (C)
+0.3
+0.1
+0.3
+0.1
+0.0
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