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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07960 and PFLU_RS31460 are separated by 70 nucleotides
PFLU_RS31460 and PFLU_RS07965 overlap by 4 nucleotides
PFLU_RS07965 and PFLU_RS07970 are separated by 276 nucleotides
PFLU_RS07970 and PFLU_RS07975 are separated by 150 nucleotides
PFLU_RS07960: PFLU_RS07960 - hypothetical protein, at 1,774,410 to 1,774,784
_RS07960
PFLU_RS31460: PFLU_RS31460 - type II toxin-antitoxin system VapC family toxin, at 1,774,855 to 1,774,987
_RS31460
PFLU_RS07965: PFLU_RS07965 - AbrB/MazE/SpoVT family DNA-binding domain-containing protein, at 1,774,984 to 1,775,241
_RS07965
PFLU_RS07970: PFLU_RS07970 - LOG family protein, at 1,775,518 to 1,776,891
_RS07970
PFLU_RS07975: PFLU_RS07975 - beta-hydroxylase, at 1,777,042 to 1,777,866
_RS07975
Group
Condition
PFLU
_RS07960
PFLU
_RS31460
PFLU
_RS07965
PFLU
_RS07970
PFLU
_RS07975
carbon source
acetate (C)
-0.5
-0.9
N.D.
-1.8
-0.2
carbon source
NAG (C); with MOPS
+0.2
+0.0
N.D.
-3.0
-0.3
carbon source
NAG (C); with MOPS
-0.2
+0.0
N.D.
-2.7
-0.2
carbon source
NAG (C); with MOPS
+0.1
-0.0
N.D.
-2.5
-0.0
carbon source
acetate (C)
-0.3
+0.2
N.D.
-1.4
-0.5
carbon source
acetate (C)
+0.7
-0.3
N.D.
-2.0
-0.2
carbon source
D-Glucose (C)
-0.8
-0.1
N.D.
-0.6
-0.2
carbon source
L-Arabinose (C)
+0.1
-0.0
N.D.
-1.2
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.0
N.D.
-1.2
+0.0
carbon source
L-Arabinose (C)
+0.1
-0.3
N.D.
-1.0
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.1
N.D.
-1.1
-0.4
carbon source
L-Arabinose (C)
-0.6
+0.6
N.D.
-0.9
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.1
N.D.
-0.7
-0.0
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
N.D.
-0.6
-0.3
carbon source
D-Glucose (C)
-0.1
-0.3
N.D.
-0.6
-0.1
carbon source
succinate (C); with MOPS
-0.3
+0.0
N.D.
-0.6
-0.1
carbon source
D-Glucose (C)
-0.1
-0.0
N.D.
-0.5
-0.2
carbon source
succinate (C)
-0.4
+0.0
N.D.
-0.4
-0.1
carbon source
D-Glucose (C); with MOPS
+0.1
-0.3
N.D.
-0.6
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
N.D.
-0.7
-0.3
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.4
N.D.
-1.0
-0.2
carbon source
Trisodium citrate (C)
+0.2
-0.2
N.D.
-0.5
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.2
N.D.
-0.5
-0.3
carbon source
NAG (C)
+0.2
+0.0
N.D.
-1.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
N.D.
-0.6
+0.0
carbon source
succinate (C); with MOPS
+0.2
-0.2
N.D.
-0.5
-0.1
carbon source
NAG (C)
+0.1
+0.3
N.D.
-0.9
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.0
N.D.
-0.5
-0.1
carbon source
Trisodium citrate (C)
+0.3
+0.2
N.D.
-0.7
-0.1
carbon source
acetate (C)
-0.2
-0.0
N.D.
+0.8
-0.1
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