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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07690 and PFLU_RS07695 are separated by 136 nucleotides
PFLU_RS07695 and PFLU_RS07700 are separated by 112 nucleotides
PFLU_RS07700 and PFLU_RS07705 are separated by 9 nucleotides
PFLU_RS07705 and PFLU_RS07710 are separated by 11 nucleotides
PFLU_RS07690: PFLU_RS07690 - helix-turn-helix transcriptional regulator, at 1,709,901 to 1,710,608
_RS07690
PFLU_RS07695: PFLU_RS07695 - beta-N-acetylhexosaminidase, at 1,710,745 to 1,711,755
_RS07695
PFLU_RS07700: PFLU_RS07700 - DEAD/DEAH box helicase, at 1,711,868 to 1,714,561
_RS07700
PFLU_RS07705: PFLU_RS07705 - hypothetical protein, at 1,714,571 to 1,715,137
_RS07705
PFLU_RS07710: PFLU_RS07710 - transcription-repair coupling factor, at 1,715,149 to 1,718,598
_RS07710
Group
Condition
PFLU
_RS07690
PFLU
_RS07695
PFLU
_RS07700
PFLU
_RS07705
PFLU
_RS07710
carbon source
acetate (C)
+0.8
-5.3
-0.3
-1.1
+0.2
carbon source
NAG (C); with MOPS
-0.4
-5.5
-0.3
-0.0
+0.4
carbon source
NAG (C); with MOPS
-0.2
-5.2
-0.2
-0.2
+0.4
carbon source
acetate (C)
+1.3
-5.1
-0.2
-0.5
-0.5
carbon source
NAG (C); with MOPS
+0.1
-5.2
+0.0
+0.2
+0.4
carbon source
L-Arabinose (C); with MOPS
+1.0
-5.5
-0.1
+0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.3
-4.2
-0.3
-0.2
-0.0
carbon source
L-Arabinose (C)
+1.6
-5.4
-0.1
-0.2
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.6
-4.4
-0.0
+0.1
-0.1
carbon source
acetate (C)
+0.9
-4.1
-0.1
-0.5
-0.1
carbon source
L-Arabinose (C)
+0.8
-4.3
-0.1
+0.1
-0.1
carbon source
L-Arabinose (C)
+1.1
-4.7
-0.1
+0.4
-0.2
carbon source
D-Glucose (C)
-0.5
-1.7
-0.0
-0.1
+0.3
carbon source
D-Xylose (C)
-1.0
-0.0
-0.1
-0.2
+0.1
carbon source
D-Glucose (C)
+0.4
-2.2
+0.0
+0.3
+0.3
carbon source
D-Glucose (C); with MOPS
+0.2
-1.5
+0.0
+0.0
+0.1
carbon source
D-Xylose (C)
-0.7
-0.2
-0.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.3
-1.9
+0.1
+0.3
+0.2
carbon source
Trisodium citrate (C)
+1.0
-1.6
-0.0
-0.3
+0.1
carbon source
succinate (C); with MOPS
+0.1
-1.3
+0.0
+0.1
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.3
-1.2
+0.0
+0.1
+0.2
carbon source
NAG (C)
-1.0
+0.6
-0.2
-0.3
+0.4
carbon source
Trisodium citrate (C)
+1.4
-2.1
-0.0
+0.1
+0.1
carbon source
NAG (C)
-1.1
+0.6
-0.2
-0.1
+0.5
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.8
-0.0
-0.0
+0.3
carbon source
succinate (C); with MOPS
-0.3
-0.6
+0.1
+0.2
+0.3
carbon source
Trisodium citrate (C)
+1.0
-1.2
-0.1
-0.1
+0.1
carbon source
succinate (C)
+0.1
-0.8
+0.0
+0.1
+0.4
carbon source
Trisodium citrate (C); with MOPS
+0.6
-0.7
-0.0
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
+0.8
-0.7
+0.1
+0.1
+0.2
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