Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07450 and PFLU_RS07455 are separated by 343 nucleotides
PFLU_RS07455 and PFLU_RS07460 are separated by 101 nucleotides
PFLU_RS07460 and PFLU_RS07465 are separated by 122 nucleotides
PFLU_RS07465 and PFLU_RS07470 overlap by 4 nucleotides
PFLU_RS07450: PFLU_RS07450 - transporter substrate-binding domain-containing protein, at 1,659,144 to 1,659,914
_RS07450
PFLU_RS07455: PFLU_RS07455 - glutamine synthetase, at 1,660,258 to 1,661,628
_RS07455
PFLU_RS07460: PFLU_RS07460 - class I SAM-dependent methyltransferase, at 1,661,730 to 1,662,329
_RS07460
PFLU_RS07465: PFLU_RS07465 - ribonuclease D, at 1,662,452 to 1,663,585
_RS07465
PFLU_RS07470: PFLU_RS07470 - hypothetical protein, at 1,663,582 to 1,663,875
_RS07470
Group
Condition
PFLU
_RS07450
PFLU
_RS07455
PFLU
_RS07460
PFLU
_RS07465
PFLU
_RS07470
carbon source
succinate (C)
+0.0
+0.1
-0.7
-0.8
-0.1
carbon source
succinate (C); with MOPS
+0.1
-0.1
-0.3
-0.4
-0.1
carbon source
D-Glucose (C)
-0.2
-0.1
-0.1
-0.4
-0.1
carbon source
succinate (C); with MOPS
+0.1
+0.1
-0.1
-0.6
-0.3
carbon source
L-Arabinose (C)
-0.2
+0.0
-0.4
-0.3
+0.1
carbon source
succinate (C)
-0.1
+0.0
-0.3
-0.3
-0.1
carbon source
acetate (C)
-0.1
+0.1
-0.0
-0.4
-0.3
carbon source
D-Glucose (C); with MOPS
+0.0
-0.0
-0.6
-0.1
+0.0
carbon source
L-Arabinose (C)
-0.2
+0.3
+0.3
-0.9
-0.2
carbon source
succinate (C); with MOPS
-0.0
+0.1
-0.2
-0.7
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
+0.1
-0.6
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
-0.0
-0.1
-0.4
+0.1
carbon source
D,L-Lactate (C)
-0.1
-0.0
-0.3
-0.1
-0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.0
-0.2
-0.3
-0.1
carbon source
NAG (C); with MOPS
-0.0
+0.1
-0.1
-0.5
-0.0
carbon source
D-Glucose (C)
+0.1
-0.0
+0.2
-0.7
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.0
+0.3
-0.5
-0.1
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.0
-0.3
-0.1
carbon source
acetate (C)
+0.2
-0.0
-0.0
-0.2
-0.3
carbon source
NAG (C)
-0.0
-0.1
+0.1
-0.2
-0.1
carbon source
NAG (C); with MOPS
+0.2
-0.0
+0.1
-0.6
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.0
+0.1
-0.5
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.1
-0.2
-0.1
+0.1
carbon source
succinate (C)
-0.2
+0.1
+0.2
-0.4
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
+0.2
-0.3
+0.1
carbon source
acetate (C)
-0.0
+0.0
+0.3
-0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.2
-0.2
+0.0
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.0
+0.5
-0.4
+0.0
carbon source
acetate (C)
+0.1
+0.1
+0.6
+0.0
-0.2
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.4
+0.2
+0.1
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