Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07430 and PFLU_RS07435 are separated by 180 nucleotides
PFLU_RS07435 and PFLU_RS07440 are separated by 66 nucleotides
PFLU_RS07440 and PFLU_RS31455 are separated by 191 nucleotides
PFLU_RS31455 and PFLU_RS07445 are separated by 46 nucleotides
PFLU_RS07430: PFLU_RS07430 - helix-turn-helix domain-containing protein, at 1,653,901 to 1,654,779
_RS07430
PFLU_RS07435: PFLU_RS07435 - 4-hydroxybenzoate 3-monooxygenase, at 1,654,960 to 1,656,153
_RS07435
PFLU_RS07440: PFLU_RS07440 - MFS transporter, at 1,656,220 to 1,657,737
_RS07440
PFLU_RS31455: PFLU_RS31455 - hypothetical protein, at 1,657,929 to 1,658,207
_RS31455
PFLU_RS07445: PFLU_RS07445 - calcium channel protein, at 1,658,254 to 1,659,093
_RS07445
Group
Condition
PFLU
_RS07430
PFLU
_RS07435
PFLU
_RS07440
PFLU
_RS31455
PFLU
_RS07445
carbon source
acetate (C)
+0.3
-0.4
-0.2
-0.7
-0.2
carbon source
Trisodium citrate (C)
-0.1
-0.2
+0.0
-0.4
-0.1
carbon source
succinate (C)
-0.0
-0.1
+0.0
-0.6
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.2
+0.0
-0.5
-0.0
carbon source
succinate (C)
+0.2
-0.2
-0.1
-0.5
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.2
-0.1
-0.4
-0.1
carbon source
acetate (C)
-0.1
-0.1
+0.1
-0.3
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.2
-0.2
-0.2
+0.1
carbon source
NAG (C); with MOPS
+0.2
-0.1
-0.0
-0.5
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.2
+0.0
-0.4
+0.0
carbon source
D-Xylose (C)
-0.0
-0.1
+0.0
-0.2
+0.0
carbon source
succinate (C)
+0.1
-0.0
-0.1
-0.3
-0.0
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.0
-0.3
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.1
+0.1
-0.3
+0.1
carbon source
NAG (C); with MOPS
+0.0
-0.1
-0.1
-0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.0
-0.1
-0.2
+0.0
carbon source
D-Glucose (C)
+0.1
-0.0
-0.0
-0.3
+0.1
carbon source
D-Glucose (C); with MOPS
-0.0
-0.0
+0.1
-0.3
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.1
-0.1
+0.0
carbon source
succinate (C); with MOPS
+0.2
-0.1
-0.1
-0.2
+0.1
carbon source
succinate (C); with MOPS
+0.1
+0.1
+0.0
-0.3
+0.1
carbon source
L-Arabinose (C)
+0.3
-0.3
-0.0
-0.0
+0.1
carbon source
D-Glucose (C)
+0.2
+0.2
+0.0
-0.3
+0.1
carbon source
acetate (C)
+0.1
-0.0
-0.2
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.2
+0.0
-0.1
-0.0
+0.0
carbon source
D-Glucose (C); with MOPS
+0.1
+0.0
+0.1
-0.1
+0.1
carbon source
L-Arabinose (C)
+0.2
-0.2
-0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
-0.1
+0.1
+0.1
carbon source
NAG (C)
+0.1
+0.0
+0.0
+0.1
-0.0
carbon source
L-Arabinose (C)
+0.4
+0.1
-0.0
-0.1
+0.1
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