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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07365 and PFLU_RS07370 are separated by 73 nucleotides
PFLU_RS07370 and PFLU_RS07375 are separated by 55 nucleotides
PFLU_RS07375 and PFLU_RS31450 overlap by 46 nucleotides
PFLU_RS31450 and PFLU_RS07380 are separated by 60 nucleotides
PFLU_RS07365: PFLU_RS07365 - SMP-30/gluconolactonase/LRE family protein, at 1,638,302 to 1,639,180
_RS07365
PFLU_RS07370: PFLU_RS07370 - MFS transporter, at 1,639,254 to 1,640,576
_RS07370
PFLU_RS07375: PFLU_RS07375 - MFS transporter, at 1,640,632 to 1,641,957
_RS07375
PFLU_RS31450: PFLU_RS31450 - hypothetical protein, at 1,641,912 to 1,642,157
_RS31450
PFLU_RS07380: PFLU_RS07380 - LysR family transcriptional regulator, at 1,642,218 to 1,643,141
_RS07380
Group
Condition
PFLU
_RS07365
PFLU
_RS07370
PFLU
_RS07375
PFLU
_RS31450
PFLU
_RS07380
carbon source
D-Glucose (C)
+0.1
-0.1
+0.0
-0.4
-0.6
carbon source
Trisodium citrate (C); with MOPS
-0.4
-0.0
-0.0
-0.1
-0.3
carbon source
acetate (C)
+0.2
+0.5
+0.0
-0.7
-0.8
carbon source
D-Glucose (C); with MOPS
-0.3
+0.2
+0.1
-0.3
-0.4
carbon source
L-Arabinose (C)
-0.6
+0.3
-0.0
-0.3
-0.1
carbon source
Trisodium citrate (C)
-0.7
+0.1
+0.1
-0.3
+0.1
carbon source
D-Glucose (C)
-0.2
+0.0
+0.0
-0.1
-0.3
carbon source
D-Glucose (C)
+0.0
+0.1
+0.0
-0.4
-0.4
carbon source
succinate (C); with MOPS
-0.3
+0.0
+0.1
-0.5
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
-0.0
-0.5
+0.1
carbon source
succinate (C); with MOPS
-0.5
+0.1
+0.1
-0.3
-0.0
carbon source
D-Glucose (C); with MOPS
-0.0
-0.0
-0.3
-0.3
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.1
+0.3
-0.3
-0.1
carbon source
NAG (C); with MOPS
-0.2
+0.1
-0.0
-0.4
+0.1
carbon source
succinate (C)
+0.2
+0.1
+0.2
-0.5
-0.3
carbon source
succinate (C)
-0.1
+0.1
-0.0
-0.4
+0.0
carbon source
NAG (C); with MOPS
-0.2
+0.2
-0.2
-0.1
-0.0
carbon source
Trisodium citrate (C)
-0.1
+0.3
+0.0
-0.1
-0.4
carbon source
NAG (C); with MOPS
-0.2
+0.1
-0.1
-0.0
+0.0
carbon source
D,L-Lactate (C)
-0.1
-0.0
-0.1
-0.1
+0.1
carbon source
NAG (C)
-0.2
-0.1
-0.0
-0.1
+0.2
carbon source
acetate (C)
-0.4
+0.3
-0.1
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.2
+0.0
-0.2
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.2
-0.2
-0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.3
+0.1
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.1
+0.1
+0.2
-0.2
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.0
-0.1
+0.1
+0.2
carbon source
acetate (C)
-0.1
+0.1
-0.2
+0.2
+0.2
carbon source
Trisodium citrate (C)
+0.1
+0.2
-0.1
-0.0
+0.1
carbon source
L-Arabinose (C)
-0.3
+0.1
-0.2
-0.0
+0.6
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