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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS30460 and PFLU_RS07190 are separated by 43 nucleotides
PFLU_RS07190 and PFLU_RS07195 are separated by 190 nucleotides
PFLU_RS07195 and PFLU_RS07200 are separated by 713 nucleotides
PFLU_RS07200 and PFLU_RS07210 are separated by 172 nucleotides
PFLU_RS30460: PFLU_RS30460 - L-aspartate oxidase, at 1,604,557 to 1,604,748
_RS30460
PFLU_RS07190: PFLU_RS07190 - tyrosine-type recombinase/integrase, at 1,604,792 to 1,606,234
_RS07190
PFLU_RS07195: PFLU_RS07195 - hypothetical protein, at 1,606,425 to 1,606,847
_RS07195
PFLU_RS07200: PFLU_RS07200 - Rha family transcriptional regulator, at 1,607,561 to 1,608,328
_RS07200
PFLU_RS07210: PFLU_RS07210 - hypothetical protein, at 1,608,501 to 1,608,791
_RS07210
Group
Condition
PFLU
_RS30460
PFLU
_RS07190
PFLU
_RS07195
PFLU
_RS07200
PFLU
_RS07210
carbon source
L-Arabinose (C)
-0.5
-0.0
-0.3
+0.0
-0.7
carbon source
L-Arabinose (C)
-0.2
+0.0
-0.1
-0.0
-0.6
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.0
-0.2
-0.0
-0.5
carbon source
L-Arabinose (C); with MOPS
-0.4
+0.0
+0.3
-0.1
-0.5
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.0
-0.3
+0.0
-0.5
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.1
-0.1
-0.0
-0.3
carbon source
D-Glucose (C); with MOPS
-0.0
+0.0
-0.3
+0.1
-0.5
carbon source
succinate (C); with MOPS
-0.4
-0.1
-0.2
+0.3
-0.3
carbon source
acetate (C)
+0.0
+0.1
-0.5
+0.1
-0.4
carbon source
acetate (C)
+0.0
+0.0
+0.1
-0.2
-0.4
carbon source
Trisodium citrate (C)
+0.0
+0.0
+0.0
-0.1
-0.5
carbon source
succinate (C); with MOPS
-0.1
-0.1
-0.0
-0.0
-0.3
carbon source
L-Arabinose (C)
+0.4
-0.0
-0.4
-0.2
-0.2
carbon source
NAG (C); with MOPS
+0.3
+0.0
-0.3
-0.0
-0.4
carbon source
succinate (C); with MOPS
+0.0
-0.0
-0.1
+0.1
-0.4
carbon source
acetate (C)
+0.4
-0.0
+0.1
-0.0
-0.8
carbon source
D-Glucose (C)
+0.2
-0.1
-0.3
+0.1
-0.2
carbon source
D-Xylose (C)
+0.1
-0.0
-0.1
-0.0
-0.2
carbon source
D-Glucose (C)
+0.2
-0.1
-0.1
+0.0
-0.3
carbon source
D-Xylose (C)
+0.2
-0.0
-0.2
+0.0
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.2
+0.3
+0.0
-0.4
carbon source
Trisodium citrate (C)
+0.3
+0.1
+0.1
+0.0
-0.6
carbon source
succinate (C)
+0.1
+0.1
-0.5
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.1
+0.0
-0.0
-0.3
carbon source
Trisodium citrate (C)
+0.5
+0.1
-0.4
+0.0
-0.2
carbon source
NAG (C); with MOPS
+0.2
+0.1
+0.1
+0.1
-0.4
carbon source
D-Glucose (C)
+0.2
+0.1
+0.3
-0.1
-0.3
carbon source
acetate (C)
-0.1
-0.0
+0.2
+0.0
+0.1
carbon source
NAG (C); with MOPS
-0.0
+0.1
+0.5
+0.1
-0.1
carbon source
NAG (C)
+0.3
-0.0
+0.5
+0.0
+0.1
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