Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS07030 and PFLU_RS07035 are separated by 88 nucleotides
PFLU_RS07035 and PFLU_RS07040 are separated by 79 nucleotides
PFLU_RS07040 and PFLU_RS07045 are separated by 22 nucleotides
PFLU_RS07045 and PFLU_RS07050 are separated by 168 nucleotides
PFLU_RS07030: PFLU_RS07030 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 1,570,579 to 1,571,079
_RS07030
PFLU_RS07035: PFLU_RS07035 - hypothetical protein, at 1,571,168 to 1,571,491
_RS07035
PFLU_RS07040: PFLU_RS07040 - type II toxin-antitoxin system HicB family antitoxin, at 1,571,571 to 1,571,981
_RS07040
PFLU_RS07045: PFLU_RS07045 - addiction module toxin, HicA family, at 1,572,004 to 1,572,186
_RS07045
PFLU_RS07050: PFLU_RS07050 - LysR family transcriptional regulator, at 1,572,355 to 1,573,248
_RS07050
Group
Condition
PFLU
_RS07030
PFLU
_RS07035
PFLU
_RS07040
PFLU
_RS07045
PFLU
_RS07050
carbon source
NAG (C)
+0.0
-0.1
-0.9
-0.3
+0.0
carbon source
NAG (C)
-0.1
+0.1
-1.0
+0.1
+0.0
carbon source
acetate (C)
+0.0
+0.1
-0.1
-0.3
-0.2
carbon source
acetate (C)
+0.3
-0.1
-0.2
-0.2
-0.3
carbon source
acetate (C)
-0.6
+0.4
-0.2
-0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.3
-0.2
-0.2
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.1
+0.4
-0.4
-0.2
carbon source
D-Xylose (C)
+0.1
+0.1
-0.3
-0.2
+0.1
carbon source
D,L-Lactate (C)
+0.2
+0.0
-0.3
-0.2
+0.1
carbon source
D-Glucose (C); with MOPS
+0.1
+0.0
+0.2
-0.6
+0.1
carbon source
D,L-Lactate (C)
+0.4
-0.1
-0.2
-0.1
-0.1
carbon source
L-Arabinose (C)
+0.2
-0.2
+0.5
-0.6
-0.0
carbon source
D-Glucose (C); with MOPS
+0.1
+0.1
+0.2
-0.3
-0.2
carbon source
NAG (C); with MOPS
+0.4
-0.0
-0.0
-0.4
+0.2
carbon source
L-Arabinose (C)
+0.6
-0.0
+0.0
-0.5
-0.0
carbon source
succinate (C)
+0.3
-0.2
-0.1
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
+0.1
-0.1
+0.2
carbon source
succinate (C)
+0.1
-0.1
-0.1
+0.3
+0.1
carbon source
NAG (C); with MOPS
+0.4
+0.2
-0.5
+0.1
+0.1
carbon source
succinate (C); with MOPS
-0.2
+0.1
+0.2
+0.2
+0.1
carbon source
D-Glucose (C)
+0.4
-0.0
-0.3
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.0
-0.1
+0.4
-0.1
carbon source
D-Glucose (C)
+0.2
-0.1
+0.3
+0.0
+0.1
carbon source
L-Arabinose (C)
+0.4
+0.1
+0.4
-0.4
+0.2
carbon source
succinate (C)
+0.6
+0.0
+0.2
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.2
-0.1
+0.1
+0.3
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.3
+0.4
-0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.1
+0.3
+0.3
+0.3
carbon source
acetate (C)
+0.7
-0.4
+0.1
+0.4
+0.4
carbon source
succinate (C); with MOPS
+0.2
+0.2
+0.2
+0.5
+0.2
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