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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06840 and PFLU_RS06845 are separated by 92 nucleotides
PFLU_RS06845 and PFLU_RS06850 are separated by 30 nucleotides
PFLU_RS06850 and PFLU_RS06855 are separated by 13 nucleotides
PFLU_RS06855 and PFLU_RS06860 are separated by 154 nucleotides
PFLU_RS06840: PFLU_RS06840 - LuxR family transcriptional regulator, at 1,532,873 to 1,533,640
_RS06840
PFLU_RS06845: PFLU_RS06845 - alkene reductase, at 1,533,733 to 1,534,788
_RS06845
PFLU_RS06850: PFLU_RS06850 - MFS transporter, at 1,534,819 to 1,535,985
_RS06850
PFLU_RS06855: PFLU_RS06855 - helix-turn-helix transcriptional regulator, at 1,535,999 to 1,536,325
_RS06855
PFLU_RS06860: PFLU_RS06860 - DUF479 domain-containing protein, at 1,536,480 to 1,537,064
_RS06860
Group
Condition
PFLU
_RS06840
PFLU
_RS06845
PFLU
_RS06850
PFLU
_RS06855
PFLU
_RS06860
carbon source
NAG (C); with MOPS
+0.1
-0.0
+0.2
-2.3
-0.2
carbon source
acetate (C)
-0.1
-0.1
+0.0
-1.7
-0.3
carbon source
NAG (C); with MOPS
+0.2
-0.1
+0.3
-2.0
-0.3
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
-0.2
-1.0
-0.4
carbon source
D-Xylose (C)
+0.1
+0.1
+0.1
-1.5
-0.1
carbon source
NAG (C); with MOPS
-0.1
-0.0
+0.3
-1.3
-0.2
carbon source
acetate (C)
+0.2
-0.0
-0.5
-0.9
-0.0
carbon source
D-Glucose (C)
+0.1
+0.1
+0.0
-1.3
-0.1
carbon source
D-Xylose (C)
+0.1
+0.2
+0.0
-1.3
-0.1
carbon source
NAG (C)
+0.1
+0.0
-0.0
-1.2
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.1
+0.1
-0.5
-0.4
carbon source
D-Glucose (C)
+0.1
-0.2
+0.2
-0.9
+0.0
carbon source
Trisodium citrate (C)
+0.0
-0.1
+0.0
-0.8
+0.2
carbon source
acetate (C)
-0.0
-0.1
+0.1
-0.2
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.2
+0.2
-0.0
-0.2
carbon source
acetate (C)
+0.2
+0.5
+0.2
-0.7
-0.4
carbon source
succinate (C)
-0.2
-0.2
+0.2
+0.0
-0.1
carbon source
D,L-Lactate (C)
-0.1
+0.0
+0.1
-0.4
+0.1
carbon source
NAG (C)
+0.1
-0.1
-0.1
-0.3
+0.2
carbon source
L-Arabinose (C)
-0.0
+0.1
-0.1
+0.2
-0.3
carbon source
D-Glucose (C); with MOPS
+0.2
-0.1
+0.0
-0.2
+0.1
carbon source
succinate (C); with MOPS
-0.1
-0.2
+0.4
-0.3
+0.1
carbon source
succinate (C); with MOPS
+0.2
-0.1
+0.2
-0.1
-0.1
carbon source
succinate (C)
-0.0
-0.1
-0.2
+0.5
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.2
+0.2
+0.2
+0.2
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.2
+0.2
-0.2
carbon source
acetate (C)
+0.1
-0.0
+0.0
+0.4
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
+0.5
+0.4
-0.5
carbon source
D-Glucose (C); with MOPS
+0.0
-0.1
+0.3
+0.1
+0.3
carbon source
D-Glucose (C)
+0.1
-0.2
+0.3
+0.3
+0.2
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