Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06740 and PFLU_RS06745 are separated by 1 nucleotides
PFLU_RS06745 and PFLU_RS06750 are separated by 176 nucleotides
PFLU_RS06750 and PFLU_RS06755 are separated by 10 nucleotides
PFLU_RS06755 and PFLU_RS06760 are separated by 10 nucleotides
PFLU_RS06740: PFLU_RS06740 - protocatechuate 3,4-dioxygenase subunit beta, at 1,506,476 to 1,507,180
_RS06740
PFLU_RS06745: PFLU_RS06745 - protocatechuate 3,4-dioxygenase subunit alpha, at 1,507,182 to 1,507,748
_RS06745
PFLU_RS06750: PFLU_RS06750 - MFS transporter, at 1,507,925 to 1,509,220
_RS06750
PFLU_RS06755: PFLU_RS06755 - 3-carboxy-cis,cis-muconate cycloisomerase, at 1,509,231 to 1,510,595
_RS06755
PFLU_RS06760: PFLU_RS06760 - 3-oxoadipate enol-lactonase, at 1,510,606 to 1,511,397
_RS06760
Group
Condition
PFLU
_RS06740
PFLU
_RS06745
PFLU
_RS06750
PFLU
_RS06755
PFLU
_RS06760
carbon source
acetate (C)
+0.1
-0.7
-0.2
-0.3
-0.4
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.3
-0.3
-0.5
-0.7
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.6
-0.1
-0.2
-0.2
carbon source
L-Arabinose (C)
+0.0
-0.1
-0.1
-0.5
-0.2
carbon source
succinate (C)
-0.2
-0.2
-0.0
-0.1
-0.3
carbon source
L-Arabinose (C)
-0.2
+0.0
+0.0
-0.2
-0.3
carbon source
succinate (C); with MOPS
+0.2
-0.3
-0.1
-0.2
-0.3
carbon source
Trisodium citrate (C)
+0.0
-0.3
-0.0
-0.0
-0.3
carbon source
succinate (C); with MOPS
+0.0
-0.1
-0.1
-0.2
-0.2
carbon source
Trisodium citrate (C)
-0.0
-0.1
-0.0
-0.3
-0.1
carbon source
NAG (C); with MOPS
-0.2
-0.1
-0.0
-0.3
+0.1
carbon source
D-Glucose (C)
-0.0
-0.2
-0.2
-0.0
-0.1
carbon source
succinate (C)
-0.0
-0.2
+0.0
+0.0
-0.2
carbon source
succinate (C); with MOPS
+0.2
-0.1
-0.2
-0.1
-0.3
carbon source
acetate (C)
-0.2
-0.3
+0.2
-0.3
+0.3
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.2
-0.1
+0.2
carbon source
D-Glucose (C)
-0.2
-0.1
+0.0
+0.1
+0.0
carbon source
D-Glucose (C)
-0.1
+0.2
-0.1
+0.1
-0.3
carbon source
D-Glucose (C); with MOPS
-0.0
-0.2
-0.1
+0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.0
-0.1
+0.2
-0.1
carbon source
D,L-Lactate (C)
+0.0
-0.3
-0.0
+0.2
-0.0
carbon source
acetate (C)
-0.2
+0.1
-0.0
+0.3
-0.3
carbon source
D-Glucose (C); with MOPS
+0.2
-0.1
-0.0
+0.1
-0.1
carbon source
D-Xylose (C)
+0.1
-0.0
+0.0
-0.2
+0.1
carbon source
NAG (C); with MOPS
+0.0
-0.2
-0.0
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.0
-0.3
+0.1
carbon source
D,L-Lactate (C)
-0.0
+0.3
+0.0
-0.1
-0.1
carbon source
L-Arabinose (C)
+0.5
-0.1
-0.1
-0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.3
-0.1
+0.1
-0.2
carbon source
acetate (C)
+0.1
+0.2
+0.0
+0.0
+0.2
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